circRNA basic information
circBase ID: hsa_circ_0000284
Name: hsa_circ_HIPK3
Synonym: circHIPK3 / hsa_circRNA001123
Host Gene: HIPK3
Genomic location(hg19): chr11:33307958-33309057:+
Genomic location(hg38): chr11:33286412-33287511:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0008170
MONDO name: ovarian cancer
Disease details: ovarian cancer / OC
Disease DO ID:
2394
Disease MeSH ID:
D010051
Disease NCIt ID:
C7431
Disease ICD11 ID:
685124533
Disease OMIM ID:
167000
Species: Human
Species details: Homo sapiens
Tissue specimen:

epithelial ovarian cancer tissues; normal ovarian tissues

Cell lines:

HO8910; A2780; OVCAR8; COC1; SKOV3; IOSE80

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: mRNA target genes
Associated microRNA: miR-10a-5p, miR-224-3p, miR-876-5p, miR-148b-3p, miR-30d-3p, miR-193a-3p, miR-579-3p, miR-499a-5p, miR-106a-3p, miR-1278, miR-30b-3p, miR-522-3p
Biological function: circHIPK3 suppresses ovarian cancer progression; its knockdown promotes proliferation, migration and invasion and inhibits apoptosis.
Molecular mechanism: Predicted ceRNA mechanism through the circHIPK3-miRNA-mRNA axis; circHIPK3 might function by sponging miRNAs.
Biological pathway or process:

proliferation (inhibits); migration (inhibits); invasion (inhibits); apoptosis (promotes); ceRNA regulation (other)

Detected method:
Q
S
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; RT-qPCR; RNA-seq; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Bioinformatics Analysis; Transfection; CCK8; Wound Healing Assay; Transwell Assay; Annexin V/PI Flow Cytometry

Clinical significance:

-

Description:

circHIPK3 is down-regulated in epithelial ovarian cancer and functions as a tumor-suppressive regulator in this study. Its knockdown promotes proliferation, migration and invasion and reduces apoptosis, potentially through a predicted circHIPK3-miRNA-mRNA ceRNA network.

Confidence score:

0.7618

Other information
Title:

Comprehensive circular RNA expression profiles and the tumor-suppressive function of circHIPK3 in ovarian cancer.

Journal: The international journal of biochemistry & cell biology
Published: 2019
PubMed ID: 31026505
Study type:

combined biological and clinical study

Data availability: Supplementary files
Code availability: -