circRNA basic information
circBase ID: -
Name: hsa_circ_STAU2
Synonym: circSTAU2
Host Gene: STAU2
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0008315
MONDO name: prostate cancer
Disease details: prostate cancer / PCa
Disease DO ID:
10283
Disease MeSH ID:
D011471
Disease NCIt ID:
C7378
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

prostate tumors; treatment-naive surgical specimen

Cell lines:

LNCaP; V16A; 22Rv1; PC-3

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UN
Associated gene: -
Associated microRNA: -
Biological function: supports prostate cancer cell proliferation; knockdown and overexpression phenotypes were evaluated
Molecular mechanism: knockdown and overexpression produced reciprocal transcriptomic effects, suggesting a circRNA-specific functional program not caused by off-target effects
Biological pathway or process:

proliferation (promotes); other pathway/process (other)

Detected method:
Q
S
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; RT-qPCR; RNA-seq; Nuclear-Cytoplasmic Fractionation; Transfection; Bioinformatics Analysis

Clinical significance:

-

Description:

circSTAU2 was one of the functionally evaluated essential circRNAs in prostate cancer cell lines. Knockdown and overexpression experiments, including RNA-seq-based transcriptomic analysis, suggested circSTAU2 contributes to proliferation-related phenotypes independently of off-target effects.

Confidence score:

0.6149

Other information
Title:

Widespread and Functional RNA Circularization in Localized Prostate Cancer.

Journal: Cell
Published: 2019
PubMed ID: 30735634
Study type:

combined biological and clinical study

Data availability: EGA: EGAS00001000900; EGA: EGAS00001002816; GEO: GSE113124; GEO: GSE84043; dbGaP ID: phs000915.v1.p; TCGA
Code availability: -