circRNA basic information
circBase ID: hsa_circ_0008621
Name: hsa_circ_HMGCS1
Synonym: hsa_circHMGCS1_016 / circHMGCS1-016
Host Gene: HMGCS1
Genomic location(hg19): chr5:43292575-43297268:-
Genomic location(hg38): chr5:43292473-43297166:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer / CRC
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

serum; CRC tissue; matched paracancerous normal tissues

Cell lines:

FHC; HCT 116; HT-29; SW1116; SW620; LoVo

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: SLC16A3, Ago2
Associated microRNA: miR-532-5p
Biological function: promotes proliferation, migration, invasion and glycolysis; inhibits apoptosis
Molecular mechanism: Acts as a ceRNA by sponging miR-532-5p to regulate SLC16A3.
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); apoptosis (inhibits); glycolysis (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

Bioinformatics Analysis; RT-qPCR; Clinical Sample Validation; Survival Analysis; Transfection; CCK8; Transwell Assay; Annexin V/PI Flow Cytometry; RIP (RNA Immunoprecipitation); RNA Pull-Down; Luciferase Reporter Assay

Clinical significance:

High serum hsa_circ_0008621 expression was associated with shorter overall survival and recurrence-free survival in CRC patients and was an independent prognostic factor.

Description:

hsa_circ_0008621 is up-regulated in CRC tissues and serum and serves as a prognostic biomarker, where higher serum levels predict worse OS and RFS. Functionally, it promotes CRC cell proliferation, migration, invasion and glycolysis while inhibiting apoptosis, at least in part via a ceRNA mechanism sponging miR-532-5p to regulate SLC16A3.

Confidence score:

0.7713

Other information
Title:

Overexpression of circular RNA hsa_circ_0008621 facilitates colorectal cancer progression and predicts poor prognosis.

Journal: Annals of gastroenterological surgery
Published: 2024
PubMed ID: 38957564
Study type:

combined biological and clinical study

Data availability: GSE138589; GSE147597; GSE197991; GSE79810; GSE122246
Code availability: -