circRNA basic information
circBase ID: hsa_circ_0112825
Name: hsa_circ_hnRNPU
Synonym: circ-hnRNPU
Host Gene: hnRNPU
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer / GC
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

gastric cancer tissues; normal gastric mucosa

Cell lines:

AGS; MGC-803; MKN-45; NCI-N87; GES-1; HeLa; PC-3; HEK293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: NONO, c-Myc, GALNT2, GALNT6, MGAT1, hnRNPU
Associated microRNA: -
Biological function: Inhibits protein glycosylation, growth, invasion, and metastasis; tumor suppressor in gastric cancer.
Molecular mechanism: circ-hnRNPU binds NONO and induces its cytoplasmic retention/aggregation, thereby repressing nuclear NONO-mediated c-Myc transactivation and cytoplasmic NONO-facilitated mRNA stability of glycosyltransferases and hnRNPU.
Biological pathway or process:

proliferation (inhibits); invasion (inhibits); metastasis (inhibits); ceRNA regulation (other)

Detected method:
Q
B
H
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; RNase R Treatment; Northern Blot; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; RT-qPCR; RNA-seq; RNA Pull-Down; RIP (RNA Immunoprecipitation); Co-IP; Luciferase Reporter Assay; Actinomycin D / DRB Stability Assay; Transfection; MTT; Colony Formation Assay; Transwell Assay; In Vivo Animal Model; IHC (Immunohistochemistry); H&E Staining; Survival Analysis; Bioinformatics Analysis

Clinical significance:

Low circ-hnRNPU levels were associated with poor survival outcome of gastric cancer patients.

Description:

circ-hnRNPU (hsa_circ_0112825), derived from hnRNPU, is down-regulated in gastric cancer and acts as a tumor suppressor. It binds NONO and promotes NONO cytoplasmic retention, which suppresses NONO-dependent c-Myc transactivation and NONO-mediated mRNA stabilization of glycosyltransferases (e.g., GALNT2/GALNT6/MGAT1), thereby inhibiting glycosylation and malignant phenotypes (growth/invasion/metastasis). Low circ-hnRNPU expression is associated with poor patient survival.

Confidence score:

0.8866

Other information
Title:

circ-hnRNPU inhibits NONO-mediated c-Myc transactivation and mRNA stabilization essential for glycosylation and cancer progression.

Journal: Journal of experimental & clinical cancer research : CR
Published: 2023
PubMed ID: 37993881
Study type:

combined biological and clinical study

Data availability: GSE246847; GSE41258; GSE11595; GSE13213; GSE9891; GSE3538; GSE51334; GSE90650; TCGA; Kaplan-Meier Plotter
Code availability: -