circRNA basic information
circBase ID: hsa_circ_0000615
Name: hsa_circ_ZNF609
Synonym: circRNA ZNF609 / circ-ZNF609
Host Gene: ZNF609
Genomic location(hg19): chr15:64791491-64792365:+
Genomic location(hg38): chr15:64499292-64500166:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005086
MONDO name: renal cell carcinoma
Disease details: renal cell carcinoma / RCC
Disease DO ID:
4450
Disease MeSH ID:
D002292
Disease NCIt ID:
-
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

-

Cell lines:

A-498; ACHN; OS-RC-2; 769-P; G-401; KiMA

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: FOXP4, Ago2
Associated microRNA: miR-138-5p
Biological function: High expression of circ-ZNF609 promotes renal carcinoma cell proliferation and invasion, while downregulation inhibits proliferation and invasion.
Molecular mechanism: circ-ZNF609 functions as a ceRNA and molecular sponge for miR-138-5p, thereby upregulating FOXP4 expression in renal carcinoma cells.
Biological pathway or process:

ceRNA regulation (other); proliferation (promotes); invasion (promotes)

Detected method:
Q
M
Validation methods:

RNase R Treatment; RT-qPCR; Microarray; Nuclear-Cytoplasmic Fractionation; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; CCK8; EdU Staining; Transwell Assay; Western Blot; Bioinformatics Analysis

Clinical significance:

-

Description:

circ-ZNF609 is up-regulated in renal carcinoma cell lines and promotes renal carcinoma cell proliferation and invasion. Mechanistically, it acts as a ceRNA by sponging miR-138-5p, thereby increasing FOXP4 expression through the circ-ZNF609/miR-138-5p/FOXP4 axis.

Confidence score:

0.7328

Other information
Title:

CircRNA ZNF609 functions as a competitive endogenous RNA to regulate FOXP4 expression by sponging miR-138-5p in renal carcinoma.

Journal: Journal of cellular physiology
Published: 2019
PubMed ID: 30478938
Study type:

biological research

Data availability: GSE100186
Code availability: -