circRNA basic information
circBase ID: hsa_circ_0058123
Name: hsa_circ_FN1
Synonym: circ_0058123
Host Gene: FN1
Genomic location(hg19): chr2:216269111-216300791:-
Genomic location(hg38): chr2:215404388-215436068:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

CRC tissues; control tissues; adjacent normal tissues; nude mice tumor tissues

Cell lines:

SW480; HCT-116; FHC

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: RAC1, Ago2, Bax, Bcl-2, Ki67
Associated microRNA: miR-939-5p
Biological function: Promotes CRC cell proliferation, migration, invasion, tube formation/angiogenesis, and in vivo tumor growth, while inhibiting apoptosis.
Molecular mechanism: circ_0058123 acts as a ceRNA/sponge for miR-939-5p to positively regulate RAC1 expression and promote CRC progression.
Biological pathway or process:

ceRNA regulation (promotes); proliferation (promotes); migration (promotes); invasion (promotes); angiogenesis (promotes); apoptosis (inhibits); metastasis (promotes); other pathway/process (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Clinical Sample Validation; Transfection; EdU Staining; Transwell Assay; Tube Formation Assay; Annexin V/PI Flow Cytometry; Western Blot; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); RNA Pull-Down; In Vivo Animal Model; IHC (Immunohistochemistry); Bioinformatics Analysis

Clinical significance:

circ_0058123 expression was closely related with TNM stage, and it may be a valuable biomarker for early diagnosis and prognosis of CRC.

Description:

circ_0058123 is up-regulated in CRC tissues and cell lines and is associated with higher TNM stage. It promotes CRC progression by sponging miR-939-5p and increasing RAC1 expression, thereby enhancing proliferation, migration, invasion, angiogenesis/tube formation, and tumor growth while suppressing apoptosis. The study proposes circ_0058123 as a potential biomarker and therapeutic target for CRC.

Confidence score:

0.8169

Other information
Title:

Circular RNA circ_0058123 Targets the miR-939-5p/RAC1 Pathway to Promote the Development of Colorectal Cancer.

Journal: Biochemical genetics
Published: 2024
PubMed ID: 37642813
Study type:

combined biological and clinical study

Data availability: The datasets used and analyzed during the current study are available from the corresponding author on reasonable request.; Supplementary material available at https://doi. org/10.1007/s10528-023-10485-8
Code availability: -