circRNA basic information
circBase ID: hsa_circ_0025039
Name: hsa_circ_FOXM1
Synonym: circ_0025039
Host Gene: FOXM1
Genomic location(hg19): chr12:2975558-2977920:-
Genomic location(hg38): chr12:2866392-2868754:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005105
MONDO name: melanoma
Disease details: melanoma
Disease DO ID:
1909
Disease MeSH ID:
D008545
Disease NCIt ID:
C3224
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

melanoma tumor samples; adjacent normal tissues; normal skin tissues; primary melanoma tissues

Cell lines:

HEMn; A375; SK-MEL-1; A2058; 293 T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: CDK4
Associated microRNA: miR-198
Biological function: Promotes melanoma cell proliferation, colony formation, invasion, glucose metabolism and tumor formation; knockdown inhibits these malignant phenotypes.
Molecular mechanism: hsa_circ_0025039 acts as a miR-198 sponge and regulates CDK4 expression through the hsa_circ_0025039/miR-198/CDK4 axis.
Biological pathway or process:

proliferation (promotes); invasion (promotes); glycolysis (promotes); ceRNA regulation (other); cell cycle (promotes)

Detected method:
Q
M
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; RT-qPCR; Microarray; Clinical Sample Validation; RNA Pull-Down; Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; Transwell Assay; Western Blot; IHC (Immunohistochemistry); In Vivo Animal Model; Survival Analysis; Bioinformatics Analysis

Clinical significance:

High hsa_circ_0025039 expression is associated with pathological node status, pathological metastasis status, clinical stage and poor prognosis in melanoma patients.

Description:

hsa_circ_0025039 is up-regulated in melanoma tissues and cell lines, and high expression is associated with worse survival. Functionally, it promotes melanoma cell growth, invasion, glucose metabolism and xenograft tumor formation by sponging miR-198 and regulating CDK4 expression.

Confidence score:

0.8709

Other information
Title:

Novel circular RNA, hsa_circ_0025039 promotes cell growth, invasion and glucose metabolism in malignant melanoma via the miR-198/CDK4 axis.

Journal: Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie
Published: 2018
PubMed ID: 30219673
Study type:

combined biological and clinical study

Data availability: -
Code availability: -