circRNA basic information
circBase ID: hsa_circ_0031017
Name: hsa_circ_TMCO3
Synonym: -
Host Gene: TMCO3
Genomic location(hg19): chr13:114149816-114175048:+
Genomic location(hg38): chr13:113495501-113520733:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
 0005005
MONDO name: clear cell renal carcinoma
Disease details: clear cell renal cell carcinoma
Disease DO ID:
 4467
Disease MeSH ID:
 -
Disease NCIt ID:
 C4033
Disease ICD11 ID:
 -
Disease OMIM ID:
 -
Species: Human
Species details: Homo sapiens
Tissue specimen:

-
Cell lines:

786-O; Caki-1; HEK 293T
In vivo animal model:

-
circRNA-disease information
Expression pattern:
DN
Associated gene: -
Associated microRNA: -
Biological function: -
Molecular mechanism: -
Biological pathway or process:

not specified
Detected method:
Q
M
Validation methods:

Microarray; Bioinformatics Analysis; RT-qPCR
Clinical significance:

-
Description:

hsa_circ_0031017 was part of the prognosis-associated ceRNA subnet and showed decreased expression in renal cancer cell lines versus HEK 293T, consistent with the subnet prediction.
Confidence score:

0.2465
Other information
Title:

Construction of circRNA-based ceRNA network and its prognosis-associated subnet of clear cell renal cell carcinoma.

Journal: Cancer medicine
Published: 2021
PubMed ID: 34569727
Study type:

combined biological and clinical study
Data availability: GSE100186; GSE71302; GSE100666; TCGA-KIRC
Code availability: -