circRNA basic information
circBase ID: -
Name: hsa_circ_ITCH
Synonym: circ-ITCH
Host Gene: ITCH
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tissues; matched adjacent tissues; adjacent non-cancerous tissues

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: Wnt/beta-catenin pathway, Dvl2
Associated microRNA: -
Biological function: tumor suppressor effect in HCC; inhibitory effect on HCC carcinogenesis
Molecular mechanism: Not explored in this study; discussed as inhibiting Wnt/beta-catenin pathway based on prior studies
Biological pathway or process:

Wnt/beta-catenin (inhibits); proliferation (inhibits)

Detected method:
Q
Validation methods:

divergent primers PCR; RT-qPCR; Clinical Sample Validation; Cohort Study; Survival Analysis; Bioinformatics Analysis

Clinical significance:

high expression of circ-ITCH was associated with favorable survival of HCC; circ-ITCH could serve as susceptibility and prognostic biomarker for HCC patients

Description:

circ-ITCH is down-regulated in HCC tumor tissues versus adjacent tissues and is associated with HCC susceptibility. Higher circ-ITCH expression predicts better overall survival, supporting a tumor-suppressive role in HCC; mechanistic details were not experimentally explored in this study (Wnt/beta-catenin inhibition is discussed mainly from prior literature).

Confidence score:

0.6023

Other information
Title:

Polymorphisms and expression pattern of circular RNA circ-ITCH contributes to the carcinogenesis of hepatocellular carcinoma.

Journal: Oncotarget
Published: 2017
PubMed ID: 28636993
Study type:

combined biological and clinical study

Data availability: -
Code availability: -