circRNA basic information
circBase ID: hsa_circ_0002813
Name: -
Synonym: circ_0002813
Host Gene: -
Genomic location(hg19): chr10:32197099-32211888:-
Genomic location(hg38): chr10:31908171-31922960:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer / CRC
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

-

Cell lines:

HCT116; Lovo; HT29; SW480

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: FUT3
Associated microRNA: miR-1343-3p, miR-541-3p
Biological function: Involved in the formation/development of 5-Fu resistance in CRC cells; potential predictive biomarker/therapeutic target for 5-Fu resistance.
Molecular mechanism: Potential competitive endogenous RNA (ceRNA) mechanism via circRNA-miRNA-mRNA regulatory axes (e.g., circ_0002813-miR-1343-3p-FUT3).
Biological pathway or process:

ceRNA regulation (other); drug resistance (promotes)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; Bioinformatics Analysis

Clinical significance:

May serve as a biomarker to predict the occurrence of 5-Fu resistance in CRC.

Description:

hsa_circ_0002813 is up-regulated in 5-Fu-resistant CRC cell lines and is proposed to promote 5-Fu resistance via a ceRNA network, including an axis involving miRNAs (e.g., miR-1343-3p/miR-541-3p) and FUT3. It is suggested as a potential biomarker and therapeutic target for 5-Fu resistance in CRC.

Confidence score:

0.2465

Other information
Title:

RNA-Seq profiling of circular RNAs in human colorectal cancer 5-fluorouracil resistance and potential biomarkers.

Journal: World journal of gastrointestinal oncology
Published: 2022
PubMed ID: 35321280
Study type:

biological research

Data availability: The datasets used during the current study were available from the corresponding authors on reasonable request.
Code availability: -