circRNA basic information
circBase ID: hsa_circ_0000006
Name: -
Synonym: -
Host Gene: -
Genomic location(hg19): chr1:1601102-1666274:-
Genomic location(hg38): chr1:1669663-1734835:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0009807
MONDO name: osteosarcoma
Disease details: osteosarcoma
Disease DO ID:
3347
Disease MeSH ID:
D012516
Disease NCIt ID:
C9145
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

OS tissues; normal bone tissues; tumor

Cell lines:

U2OS; SJSA1; hfOB 1.19

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: BDNF
Associated microRNA: miR-646
Biological function: Enhances osteosarcoma progression and DOX resistance by promoting proliferation, migration and invasion and inhibiting apoptosis; circ_0000006 knockdown increases DOX sensitivity and suppresses tumor growth.
Molecular mechanism: ceRNA mechanism: circ_0000006 sponges miR-646, relieving miR-646-mediated repression of BDNF (miR-646 binds BDNF 3'UTR).
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); apoptosis (inhibits); ceRNA regulation (promotes); drug resistance (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; Transwell Assay; Wound Healing Assay; Annexin V/PI Flow Cytometry; In Vivo Animal Model; Western Blot; Clinical Sample Validation; Bioinformatics Analysis

Clinical significance:

-

Description:

circ_0000006 is up-regulated in osteosarcoma tissues/cells and is reduced by doxorubicin treatment. It promotes malignant phenotypes and DOX resistance by sponging miR-646 to increase BDNF; circ_0000006 knockdown enhances DOX-mediated anti-tumor effects and suppresses xenograft tumor growth.

Confidence score:

0.7183

Other information
Title:

Doxorubicin inhibits osteosarcoma progression by regulating circ_0000006/miR-646/ BDNF axis.

Journal: Journal of orthopaedic surgery and research
Published: 2021
PubMed ID: 34717683
Study type:

combined biological and clinical study

Data availability: All data generated or analyzed during this study are included in this article.
Code availability: -