circRNA basic information
circBase ID: -
Name: hsa_circ_CDR1
Synonym: ciRS-7 / CDR1as
Host Gene: CDR1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005494
MONDO name: triple-negative breast carcinoma
Disease details: triple-negative breast cancer / TNBC
Disease DO ID:
0060081
Disease MeSH ID:
D064726
Disease NCIt ID:
C71732
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

TNBC clinical specimens; TNBC tissues; breast cancer tissues; normal adjacent tissues; metastatic tumor tissues of lung and liver

Cell lines:

MDA-MB-231; BT-549; MCF-7; MDA-MB-453

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: matrix metalloproteinases family members (MMPs), MMP2, MMP17, AGO2
Associated microRNA: miR-1299, miR-7
Biological function: ciRS-7 promotes TNBC cell migration, invasion, and liver and lung metastasis; knockdown of ciRS-7 suppresses these metastatic phenotypes without an apparent effect on proliferation.
Molecular mechanism: ciRS-7 acts as a ceRNA/sponge of miR-1299 in TNBC cells, releasing miR-1299-mediated repression and enhancing MMP2/MMP17 and MMP family expression to maintain migration and invasion.
Biological pathway or process:

migration (promotes); invasion (promotes); metastasis (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; RT-qPCR; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; CCK8; Wound Healing Assay; Transwell Assay; In Vivo Animal Model; H&E Staining; Western Blot; Bioinformatics Analysis

Clinical significance:

ciRS-7 is highly expressed in TNBC and its expression is associated with tumor infiltration, lymphnode metastasis, pathological grade, clinical stage, and poor clinicopathological characteristics.

Description:

ciRS-7 is up-regulated in TNBC tissues and cells and is associated with aggressive clinicopathological features. It promotes TNBC migration, invasion, and metastasis by acting as a ceRNA for miR-1299, thereby enhancing MMP2/MMP17 and MMP family expression.

Confidence score:

0.8278

Other information
Title:

Circular RNA ciRS-7 Maintains Metastatic Phenotypes as a ceRNA of miR-1299 to Target MMPs.

Journal: Molecular cancer research : MCR
Published: 2018
PubMed ID: 30072582
Study type:

combined biological and clinical study

Data availability: -
Code availability: -