circRNA basic information
circBase ID: hsa_circ_0028173
Name: -
Synonym: -
Host Gene: -
Genomic location(hg19): chr12:110764194-110780253:+
Genomic location(hg38): chr12:110326389-110342448:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0004986
MONDO name: urinary bladder carcinoma
Disease details: Bladder cancer
Disease DO ID:
4007
Disease MeSH ID:
-
Disease NCIt ID:
C4912
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

BC tumor tissues; non-tumor tissues; adjacent nontumor tissues

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DS
Associated gene: TPX2, GATA3
Associated microRNA: hsa-miR-338-3p
Biological function: May function as a ceRNA in bladder cancer by capturing hsa-miR-338-3p and involving TPX2 and GATA3, but its exact role requires further determination due to inconsistent qRT-PCR validation.
Molecular mechanism: ceRNA mechanism; hsa_circ_0028173 may capture hsa-miR-338-3p to regulate TPX2 and GATA3.
Biological pathway or process:

ceRNA regulation (other); lipid metabolism (other); p53 signaling (other); other pathway/process (other)

Detected method:
M
Validation methods:

Microarray; RT-qPCR; Clinical Sample Validation; Bioinformatics Analysis

Clinical significance:

Potential biomarker or therapeutic target for bladder cancer diagnosis and treatment, but the exact role needs further determination.

Description:

hsa_circ_0028173 was identified as dysregulated in bladder cancer, with integrated analysis suggesting upregulation but qRT-PCR showing an inconsistent trend. The study proposes a possible hsa_circ_0028173/hsa-miR-338-3p/TPX2/GATA3 ceRNA axis, but states that its exact role in BC requires further study.

Confidence score:

0.4032

Other information
Title:

Identification of circRNA-miRNA-mRNA Regulatory Network in Bladder Cancer by Integrated Analysis.

Journal: Urologia internationalis
Published: 2021
PubMed ID: 33789319
Study type:

combined bioinformatics and clinical study

Data availability: GSE65635; GSE40355; GSE39093; GSE92675
Code availability: -