circRNA basic information
circBase ID: hsa_circ_0079530
Name: hsa_circ_Twist1
Synonym: -
Host Gene: Twist1
Genomic location(hg19): chr7:19155090-19155754:-
Genomic location(hg38): chr7:19115467-19116131:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005233
MONDO name: non-small cell lung carcinoma
Disease details: Non-small cell lung cancer / NSCLC
Disease DO ID:
3908
Disease MeSH ID:
D002289
Disease NCIt ID:
C2926
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

NSCLC tissues; paired adjacent non-tumorous tissues

Cell lines:

A549; H1299; H460; Calu1; BEAS-2B

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: -
Associated microRNA: -
Biological function: Promotes NSCLC cell proliferation, cell cycle progression, migration and invasion, and regulates EMT; knockdown restrains proliferation, induces cell cycle arrest, and impairs migration and invasion.
Molecular mechanism: hsa_circ_0079530 promotes proliferation and cell cycle progression through inducing cell cycle-related proteins, and promotes invasion and migration through regulating EMT; the precise mechanism was not fully elucidated.
Biological pathway or process:

proliferation (promotes); cell cycle (promotes); migration (promotes); invasion (promotes); EMT (promotes)

Detected method:
Q
Validation methods:

RNase R Treatment; RT-qPCR; Clinical Sample Validation; Transfection; CCK8; Colony Formation Assay; Cell Cycle Assay; Wound Healing Assay; Transwell Assay; Western Blot; ROC Analysis; Bioinformatics Analysis

Clinical significance:

High hsa_circ_0079530 expression was correlated with tumor size and lymph node metastasis; ROC analysis suggested diagnostic value for differentiating NSCLC tissues from normal controls; authors suggested potential as a prognosis predictor and therapeutic target.

Description:

hsa_circ_0079530 is up-regulated in NSCLC tissues and cell lines and is associated with tumor size and lymph node metastasis. Functional knockdown experiments indicate that it acts as an oncogenic circRNA by promoting proliferation, cell cycle progression, migration, invasion and EMT-related changes, while ROC analysis suggests potential diagnostic biomarker value.

Confidence score:

0.713

Other information
Title:

Hsa_circ_0079530 promotes cell proliferation and invasion in non-small cell lung cancer.

Journal: Gene
Published: 2018
PubMed ID: 29689350
Study type:

combined biological and clinical study

Data availability: -
Code availability: -