circRNA basic information
circBase ID: -
Name: hsa_circ_PVT1
Synonym: circular RNA PVT1 / circPVT1
Host Gene: PVT1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0004967
MONDO name: acute lymphoblastic leukemia
Disease details: acute lymphoblastic leukemia / ALL
Disease DO ID:
9952
Disease MeSH ID:
-
Disease NCIt ID:
C3167
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

bone marrow / BM samples

Cell lines:

Karpas; Jurkat; Nalm-6; CCRF-CEM; Raji

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: c-Myc, Bcl-2
Associated microRNA: -
Biological function: Promotes ALL cell proliferation and inhibits apoptosis; knockdown causes cell growth arrest and apoptosis.
Molecular mechanism: circPVT1 regulates c-Myc and Bcl-2 protein expression at the post-transcriptional level; the authors propose it may act as a miRNA sponge.
Biological pathway or process:

proliferation (promotes); apoptosis (inhibits); ceRNA regulation (other)

Detected method:
Q
Validation methods:

Sanger Sequencing; RT-qPCR; Clinical Sample Validation; Transfection; CCK8; Annexin V/PI Flow Cytometry; Western Blot; Nuclear-Cytoplasmic Fractionation; ROC Analysis

Clinical significance:

Potential therapeutic target in ALL; ROC analysis suggested circPVT1 may not be considered as a diagnostic marker in this cohort.

Description:

circPVT1 is upregulated in acute lymphoblastic leukemia bone marrow samples and ALL cell lines. Functional knockdown experiments show that circPVT1 promotes ALL cell proliferation and suppresses apoptosis, at least partly through maintaining c-Myc and Bcl-2 protein expression. The study suggests circPVT1 has an oncogenic role and may represent a therapeutic target in ALL.

Confidence score:

0.7126

Other information
Title:

Circular RNA PVT1 expression and its roles in acute lymphoblastic leukemia.

Journal: Epigenomics
Published: 2018
PubMed ID: 29693417
Study type:

combined biological and clinical study

Data availability: -
Code availability: -