circRNA basic information
circBase ID: -
Name: hsa_circ_YAP
Synonym: circ-YAP / circYAP
Host Gene: YAP
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer / CRC
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

fresh frozen tissues; paraffin embedded tissues

Cell lines:

FHC; HT-29; SW480; DLD1; HCT116; SW620; LoVo; HEK293T; TC71 PDX cells

In vivo animal model:

patient-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: YTHDF3, eIF4G2, eIF4A, eIF4B, LATS1, YAP/TEAD1 complex
Associated microRNA: -
Biological function: promotes CRC cell migration and invasion; facilitates liver metastasis
Molecular mechanism: circ-YAP is translated (m6A-dependent) into YAP-220aa; YTHDF3 binds m6A-modified circ-YAP and recruits eIF4G2 translation initiation complex; YAP-220aa competitively binds LATS1, reduces YAP phosphorylation, promotes YAP nuclear translocation and activation of pro-metastasis genes; YAP/TEAD complex transactivates circ-YAP forming a positive feedback loop
Biological pathway or process:

Hippo/YAP (promotes); migration (promotes); invasion (promotes); metastasis (promotes); m6A modification (promotes)

Detected method:
Q
M
Validation methods:

RT-qPCR; Microarray; RNA-seq; FISH / smFISH; ISH (In Situ Hybridization); RNase R Treatment; Actinomycin D / DRB Stability Assay; Sanger Sequencing; Clinical Sample Validation; ROC Analysis; Survival Analysis; Transfection; Wound Healing Assay; Transwell Assay; CCK8; RIP (RNA Immunoprecipitation); RNA Pull-Down; Luciferase Reporter Assay; ChIP / ChIP-seq; Co-IP; Western Blot; IF (Immunofluorescence); IHC (Immunohistochemistry); In Vivo Animal Model; Bioinformatics Analysis

Clinical significance:

upregulated in CRC with liver metastasis; AUC 0.8433 for predicting CRC liver metastasis; high circ-YAP associated with shorter survival time

Description:

circ-YAP is upregulated in CRC with liver metastasis and predicts worse survival. It promotes migration/invasion and liver metastasis by m6A-dependent translation into YAP-220aa, which binds LATS1 to activate YAP nuclear signaling, and YAP/TEAD further enhances circ-YAP transcription to form a positive feedback loop.

Confidence score:

0.9003

Other information
Title:

A positive feedback circuit driven by m6A-modified circular RNA facilitates colorectal cancer liver metastasis.

Journal: Molecular cancer
Published: 2023
PubMed ID: 38087322
Study type:

combined biological and clinical study

Data availability: available from the corresponding author upon reasonable request
Code availability: -