circRNA basic information
circBase ID: hsa_circ_0001756
Name: hsa_circ_HIPK2
Synonym: circular RNA HIPK2
Host Gene: HIPK2
Genomic location(hg19): chr7:139415730-139416814:-
Genomic location(hg38): chr7:139715931-139717015:-
Subcellular localization: extracellular
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0002009
MONDO name: major depressive disorder
Disease details: major depressive disorder
Disease DO ID:
1470
Disease MeSH ID:
D003865
Disease NCIt ID:
C35094
Disease ICD11 ID:
-
Disease OMIM ID:
608516
Species: Human
Species details: Homo sapiens
Tissue specimen:

plasma

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: AGO2, EIF4A3, FUS, HIPK2
Associated microRNA: -
Biological function: Potential plasma biomarker for diagnosing MDD and predicting response to antidepressive treatment; positively correlated with neuropsychological assessment scores in MDD patients; bioinformatically predicted to participate in MDD-related pathophysiological processes.
Molecular mechanism: Bioinformatics-predicted ceRNA mechanism, RNA-binding protein interaction, and parent gene-related biological processes; predicted pathways include p53 signaling pathway, PI3K-Akt signaling pathway, AMPK signaling pathway, TNF signaling pathway, Hippo signaling pathway and Ras signaling pathway.
Biological pathway or process:

ceRNA regulation (other); p53 signaling (other); PI3K/AKT (other); AMPK (other); Hippo/YAP (other); inflammation (other); other pathway/process (other)

Detected method:
Q
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RT-qPCR; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis; Cohort Study

Clinical significance:

circHIPK2 could serve as a potential biomarker for diagnosing MDD and predicting therapeutic effects of MDD; baseline circHIPK2 levels showed AUC 0.796 for MDD diagnosis, and the 14-day change rate showed AUC 0.819 for predicting antidepressive effects.

Description:

The study reports that plasma circHIPK2/hsa_circ_0001756 is up-regulated in patients with major depressive disorder and correlates with several depression-related neuropsychological scores. It is proposed as a blood-based biomarker for MDD diagnosis and for predicting response to 14-day antidepressive treatment, while bioinformatics analyses suggest potential ceRNA, RBP-interaction, and host-gene-related mechanisms.

Confidence score:

0.6023

Other information
Title:

Plasma circRNA HIPK2 as a putative biomarker for the diagnosis and prediction of therapeutic effects in major depressive disorder.

Journal: Clinica chimica acta; international journal of clinical chemistry
Published: 2024
PubMed ID: 38065380
Study type:

combined clinical and bioinformatics study

Data availability: Supplementary data: https://doi.org/10.1016/j.cca.2023.117694
Code availability: -