circRNA basic information
circBase ID: hsa_circ_0006470
Name: -
Synonym: circRNA_0006470
Host Gene: -
Genomic location(hg19): chr1:12061457-12062160:+
Genomic location(hg38): chr1:12001400-12002103:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer / GC
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

-

Cell lines:

GES-1; AGS; HGC-27; Hs 746.T; SNU-1

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: Receptor tyrosine kinase-like orphan receptor 1 (ROR1), phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha (PI3KCA)
Associated microRNA: miR-27b-3p
Biological function: promotes GC cell proliferation, migration and invasion; suppresses apoptosis; inhibits autophagy machinery activation
Molecular mechanism: hsa_circ_0006470 acts as a ceRNA sponge for miR-27b-3p, regulating the miR-27b-3p/ROR1 axis and the miR-27b-3p/PI3KCA axis to promote malignant phenotypes and repress autophagy in GC cells.
Biological pathway or process:

ceRNA regulation (promotes); proliferation (promotes); migration (promotes); invasion (promotes); apoptosis (inhibits); autophagy (inhibits)

Detected method:
Q
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RT-qPCR; FISH / smFISH; Luciferase Reporter Assay; Bioinformatics Analysis; Transfection; CCK8; Transwell Assay; Western Blot; IF (Immunofluorescence)

Clinical significance:

could be explored as new targets for GC diagnosis and treatment mediated by the non-coding RNAs and epigenetic regulation

Description:

hsa_circ_0006470 is up-regulated in gastric cancer cell lines and acts as an oncogenic circRNA. It sponges miR-27b-3p to regulate ROR1 and PI3KCA, thereby promoting proliferation, migration and invasion while suppressing autophagy in GC cells.

Confidence score:

0.6722

Other information
Title:

circRNA_0006470 promotes the proliferation and migration of gastric cancer cells by functioning as a sponge of miR-27b-3p.

Journal: Neoplasma
Published: 2021
PubMed ID: 34641696
Study type:

biological research

Data availability: Starbase database (http:// starbase.sysu.edu.cn/starbase2/); TargetScan database (http://www.targetscan.org/vert_72/)
Code availability: -