circRNA basic information
circBase ID: hsa_circ_0001947
Name: hsa_circ_AFF2
Synonym: circ_0001947 / circ0001947
Host Gene: AFF2
Genomic location(hg19): chrX:147743428-147744289:+
Genomic location(hg38): chrX:148661907-148662768:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer / GC
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissues; adjacent normal tissues; plasma

Cell lines:

GES-1; AGS; MFC; HEK293

In vivo animal model:

syngeneic model

circRNA-disease information
Expression pattern:
UP
Associated gene: CD39 / ENTPD1, AGO2
Associated microRNA: miR-661, miR-671-5p
Biological function: promotes proliferation, migration, and invasion of gastric cancer cells; facilitates CD8+ T cell exhaustion; promotes anti-PD-1 resistance
Molecular mechanism: ceRNA mechanism: circ_0001947 sponges miR-661 and miR-671-5p to increase CD39 (ENTPD1), leading to CD8+ T cell exhaustion and anti-PD-1 resistance; transmitted via sEVs
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); immune regulation (promotes); T cell exhaustion (promotes); drug resistance (promotes); ceRNA regulation (promotes)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Sanger Sequencing; FISH / smFISH; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; CCK8; Transwell Assay; Wound Healing Assay; In Vivo Animal Model; IHC (Immunohistochemistry); Flow Cytometry(Non-apoptosis/cycle); Clinical Sample Validation; Cohort Study; Survival Analysis; Bioinformatics Analysis; Western Blot

Clinical significance:

circ_0001947 was associated with poor clinical outcome and correlated with poor prognosis for GC patients

Description:

circ_0001947 (circAFF2) is up-regulated in gastric cancer and enriched in GC-derived sEVs. It promotes tumor cell proliferation/migration/invasion and drives CD8+ T cell exhaustion and anti-PD-1 resistance by sponging miR-661/miR-671-5p to increase CD39 (ENTPD1).

Confidence score:

0.8823

Other information
Title:

Circ_0001947 encapsulated by small extracellular vesicles promotes gastric cancer progression and anti-PD-1 resistance by modulating CD8+ T cell exhaustion.

Journal: Journal of nanobiotechnology
Published: 2024
PubMed ID: 39272146
Study type:

combined biological and clinical study

Data availability: GSE131414; GSE152309; GSE163416; GSE183904; GSE167297
Code availability: -