circRNA basic information
circBase ID: -
Name: -
Synonym: CDR1as / ciRS-7
Host Gene: -
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma / HCC
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

human HCC tissues; adjacent liver tissues; HCC tissue microarray

Cell lines:

HepG2; Huh7; THLE-3; MCF-7; HeLa; 293T

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: EGFR
Associated microRNA: miR-7
Biological function: CDR1as promotes HCC cell proliferation, enhances cell adhesion, promotes G1/S phase transition, and reduces migration; its effect on cell invasion was reported as unaffected in CDR1as-overexpressing HepG2 cells.
Molecular mechanism: CDR1as regulates HCC cell proliferation and cell cycle at least partly through the miR-7/EGFR axis; quantitative proteomics identified CDR1as-regulated proteins enriched in proliferation and cell-cycle processes.
Biological pathway or process:

proliferation (promotes); cell cycle (promotes); migration (inhibits); EGFR (promotes); ceRNA regulation (other); PI3K/AKT (other); PI3K/AKT/mTOR (other)

Detected method:
Q
H
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RT-qPCR; FISH / smFISH; Clinical Sample Validation; Transfection; CCK8; Cell Cycle Assay; Wound Healing Assay; Transwell Assay; Western Blot; IF (Immunofluorescence); Bioinformatics Analysis

Clinical significance:

CDR1as was significantly lower in human HCC tissues than adjacent liver tissues, suggesting disease-associated expression alteration; no diagnostic, prognostic, or survival performance was evaluated in this study.

Description:

This study reports that CDR1as is downregulated in HCC tissues and cell lines, but gain-of-function experiments show that CDR1as promotes HCC cell proliferation, cell-cycle progression, and adhesion while reducing migration. Mechanistically, CDR1as suppresses miR-7 and increases EGFR expression, forming a CDR1as/miR-7/EGFR regulatory axis that contributes to proliferation and cell-cycle effects in HCC cells.

Confidence score:

0.6835

Other information
Title:

Quantitative Proteomics Reveals the Regulatory Networks of Circular RNA CDR1as in Hepatocellular Carcinoma Cells.

Journal: Journal of proteome research
Published: 2017
PubMed ID: 28892615
Study type:

combined biological and clinical study

Data availability: PeptideAtlas PASS01007; Table S1; Table S2; Table S3; Table S4; Table S5; Table S6; Table S7; Table S8
Code availability: -