circRNA basic information
circBase ID: hsa_circ_0005402
Name: hsa_circ_ANXA2
Synonym: circ_0005402
Host Gene: ANXA2
Genomic location(hg19): chr15:60648117-60674640:-
Genomic location(hg38): chr15:60355918-60382441:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005301
MONDO name: multiple sclerosis
Disease details: multiple sclerosis / MS
Disease DO ID:
2377
Disease MeSH ID:
D009103
Disease NCIt ID:
C3243
Disease ICD11 ID:
1298865187
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

peripheral blood leucocytes; peripheral blood cells; whole blood

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: AGO2, EIF4A3, LIN28A, IGF2BP1, PTB
Associated microRNA: miR-1248, miR-766
Biological function: Underexpressed in RR-MS peripheral blood and proposed as a blood biomarker for multiple sclerosis; no disease functional assays were reported.
Molecular mechanism: Bioinformatic prediction of miRNA binding sites and RNA-binding protein binding sites; possible involvement in transcriptome regulation, parental gene expression regulation, or RBP interaction.
Biological pathway or process:

ceRNA regulation (other); other pathway/process (other)

Detected method:
Q
M
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; RT-qPCR; Microarray; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis

Clinical significance:

Potential blood biomarker for RR-MS; ROC AUC 0.899 with p-value < 0.001, sensitivity 94.4%, and specificity 75.0%.

Description:

circ_0005402 is a human ANXA2-derived circRNA that is significantly downregulated in peripheral blood from RR-MS patients. Its expression showed biomarker potential for RR-MS with a significant ROC AUC of 0.899, and bioinformatic analysis predicted miRNA and RBP binding sites.

Confidence score:

0.6841

Other information
Title:

Circular RNA profiling reveals that circular RNAs from ANXA2 can be used as new biomarkers for multiple sclerosis.

Journal: Human molecular genetics
Published: 2017
PubMed ID: 28651352
Study type:

combined biological and clinical study

Data availability: Supplementary Table 1
Code availability: -