circRNA basic information
circBase ID: hsa_circ_0004771
Name: hsa_circ_NRIP1
Synonym: circNRIP1
Host Gene: NRIP1
Genomic location(hg19): chr21:16386664-16415895:-
Genomic location(hg38): chr21:15014343-15043574:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0009807
MONDO name: osteosarcoma
Disease details: osteosarcoma / OS
Disease DO ID:
3347
Disease MeSH ID:
D012516
Disease NCIt ID:
C9145
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

OS cell xenografts; tumor tissues

Cell lines:

hFOB1.19; MG-63 / MG63; MNNG/HOS / HOS; 143B; U2OS; HEK-293T / HEK293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: MIA2
Associated microRNA: miR-1200
Biological function: Suppresses osteosarcoma cell proliferation, migration, invasion, and xenograft growth.
Molecular mechanism: circNRIP1 functions as a miRNA sponge for miR-1200, thereby upregulating the miR-1200 target gene MIA2 and inhibiting osteosarcoma progression.
Biological pathway or process:

proliferation (inhibits); migration (inhibits); invasion (inhibits); ceRNA regulation (promotes); metastasis (inhibits)

Detected method:
Q
M
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; RT-qPCR; Microarray; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Luciferase Reporter Assay; Transfection; CCK8; EdU Staining; Colony Formation Assay; Transwell Assay; Wound Healing Assay; In Vivo Animal Model; H&E Staining; IHC (Immunohistochemistry); Western Blot; Bioinformatics Analysis

Clinical significance:

Potential novel approach to control osteosarcoma progression clinically in the future.

Description:

circNRIP1 (hsa_circ_0004771), derived from NRIP1, is downregulated in osteosarcoma cell lines and mainly localized in the cytoplasm. Its overexpression suppresses osteosarcoma proliferation, migration, invasion, and xenograft growth by sponging miR-1200 and upregulating the miR-1200 target gene MIA2.

Confidence score:

0.8109

Other information
Title:

CircNRIP1 acts as a sponge of miR-1200 to suppress osteosarcoma progression via upregulation of MIA2.

Journal: American journal of cancer research
Published: 2022
PubMed ID: 35812061
Study type:

biological research

Data availability: GSE96964
Code availability: -