circRNA basic information
circBase ID: hsa_circ_0081519
Name: hsa_circ_EPHB4
Synonym: circEPHB4
Host Gene: EPHB4
Genomic location(hg19): chr7:100400186-100417918:-
Genomic location(hg38): chr7:100802564-100820296:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0021042
MONDO name: glioma
Disease details: gliomas
Disease DO ID:
-
Disease MeSH ID:
D005910
Disease NCIt ID:
C3059
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

glioma tissues; para‐tumor normal brain tissues; xenograft tumors

Cell lines:

NHA; A172; SHG‐44; LN229; 293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: SOX10, Nestin, Ago2
Associated microRNA: miR‐637
Biological function: Promotes glioma stemness, self-renewal/proliferation and glycolysis; inhibits apoptosis; promotes xenograft growth in vivo.
Molecular mechanism: circEPHB4 sponges miR-637 and releases suppression of SOX10, increasing SOX10 and downstream Nestin; confirmed by luciferase reporter assay and Ago2-RIP.
Biological pathway or process:

stemness (promotes); proliferation (promotes); cell cycle (promotes); apoptosis (inhibits); glycolysis (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; Clinical Sample Validation; Survival Analysis; Bioinformatics Analysis; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Transfection; MTT; Colony Formation Assay; Cell Cycle Assay; Annexin V/PI Flow Cytometry; Flow Cytometry(Non-apoptosis/cycle); Western Blot; IHC (Immunohistochemistry); In Vivo Animal Model

Clinical significance:

Higher circEPHB4 level was independently correlated with reduced overall survival of glioma patients; high circEPHB4 expression was associated with advanced clinical stage and distant metastasis.

Description:

circEPHB4 is up-regulated in gliomas and promotes glioma stemness, proliferation/cell-cycle progression, and glycolysis while inhibiting apoptosis. Mechanistically, it acts as a ceRNA by sponging miR-637, thereby up-regulating SOX10 and its downstream target Nestin; high circEPHB4 is associated with poorer overall survival.

Confidence score:

0.7794

Other information
Title:

CircRNA EPHB4 modulates stem properties and proliferation of gliomas via sponging miR-637 and up-regulating SOX10.

Journal: Molecular oncology
Published: 2021
PubMed ID: 33085838
Study type:

combined biological and clinical study

Data availability: The Cancer Genome Atlas (TCGA)
Code availability: -