circRNA basic information
circBase ID: hsa_circ_0065214
Name: hsa_circ_SCAP
Synonym: circ_0065214
Host Gene: SCAP
Genomic location(hg19): chr3:47466974-47476627:-
Genomic location(hg38): chr3:47425484-47435137:-
Subcellular localization: nucleus and cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: breast cancer
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

BC tissues; serum; paired paracancerous tissues

Cell lines:

MCF-10A; MDA-MB-231; MCF-7; HEK-293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: GPNMB
Associated microRNA: miR-188-3p
Biological function: Promotes breast cancer cell proliferation, migration, invasion, tumorigenicity and EMT-related malignant behavior, and inhibits autophagy.
Molecular mechanism: circ_0065214 acts as a ceRNA/miRNA sponge that adsorbs miR-188-3p, relieving miR-188-3p-mediated repression of GPNMB.
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); EMT (promotes); autophagy (inhibits); cell cycle (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; RT-qPCR; Microarray; Clinical Sample Validation; Nuclear-Cytoplasmic Fractionation; Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; Cell Cycle Assay; Transwell Assay; Wound Healing Assay; Western Blot; RNA-seq; IHC (Immunohistochemistry); In Vivo Animal Model; H&E Staining; ROC Analysis; Bioinformatics Analysis

Clinical significance:

circ_0065214 has potential diagnostic value in breast cancer serum; combined application with CEA and CA-153 can further improve diagnostic efficiency.

Description:

circ_0065214 is an SCAP-derived human circRNA up-regulated in breast cancer tissues, serum and cell lines. It promotes breast cancer proliferation, migration, invasion and tumor growth while inhibiting autophagy through a circ_0065214/miR-188-3p/GPNMB ceRNA axis. Serum circ_0065214 also shows diagnostic potential for breast cancer, especially when combined with CEA and CA-153.

Confidence score:

0.8585

Other information
Title:

A comprehensive evaluation of circ_0065214/ miR-188-3p/GPNMB axis in breast cancer.

Journal: Cellular signalling
Published: 2024
PubMed ID: 38141793
Study type:

combined biological and clinical study

Data availability: GSE101123; Supplementary data: https://doi.org/10.1016/j.cellsig.2023.111019; All data included in this study are available upon request by contact with the corresponding author.
Code availability: -