circRNA basic information
circBase ID: hsa_circ_0005567
Name: hsa_circ_EPS15
Synonym: hsa_circ_100226
Host Gene: EPS15
Genomic location(hg19): chr1:51868106-51874004:-
Genomic location(hg38): chr1:51402434-51408332:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005178
MONDO name: osteoarthritis
Disease details: osteoarthritis
Disease DO ID:
8398
Disease MeSH ID:
D010003
Disease NCIt ID:
C3293
Disease ICD11 ID:
558562409
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

articular cartilage

Cell lines:

primary chondrocytes

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: TNF-alpha
Associated microRNA: miR-138, miR-145, miR-24, miR-620, miR-875
Biological function: Regulates TNF-alpha expression and promotes extracellular matrix (ECM) degradation in chondrocytes under mechanical stress; its knockdown suppresses TNF-alpha and increases ECM formation.
Molecular mechanism: Putative miRNA sponge (decoy) mechanism, highlighting miR-875 as a shared miRNA between circRNA-MSR and TNF-alpha 3′ UTR, suggesting ceRNA-like regulation of TNF-alpha.
Biological pathway or process:

ceRNA regulation (other); inflammation (promotes); other pathway/process (promotes)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; Bioinformatics Analysis; Transfection; Western Blot; IF (Immunofluorescence)

Clinical significance:

Potential therapeutic target for OA (siRNA knockdown proposed to inhibit ECM degradation).

Description:

In osteoarthritis cartilage, circRNA-MSR (hsa_circ_100226; EPS15-derived) is upregulated in damaged regions and increases under mechanical stress in primary chondrocytes. Loss-of-function via siRNA reduces TNF-alpha and restores ECM markers, and bioinformatics suggests it may act as a miRNA sponge (notably involving miR-875) to modulate TNF-alpha.

Confidence score:

0.4852

Other information
Title:

Emerging Roles of circRNA Related to the Mechanical Stress in Human Cartilage Degradation of Osteoarthritis.

Journal: Molecular therapy. Nucleic acids
Published: 2017
PubMed ID: 28624198
Study type:

combined biological and clinical study

Data availability: http://dx.doi.org/10.1016/j.omtn.2017.04.004
Code availability: -