circRNA basic information
circBase ID: -
Name: hsa_circ_SHPRH
Synonym: circSHPRH / circ-SHPRH
Host Gene: SHPRH
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005072
MONDO name: neuroblastoma
Disease details: neuroblastoma / NB
Disease DO ID:
769
Disease MeSH ID:
D009447
Disease NCIt ID:
C3270
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

olfactory NB patient samples; healthy neural control sample

Cell lines:

IMR-32; SK-N-SH; SH-SY5Y; SK-N-AS; SK-N-SH; HCN-2

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: Bcl-2, Caspase-3, SHPRH-146aa, RUNX1, NFKBIA
Associated microRNA: -
Biological function: Inhibits neuroblastoma cell proliferation, migration, and invasion; promotes apoptosis.
Molecular mechanism: circ-SHPRH induces apoptosis with downregulation of Bcl-2 and upregulation of Caspase-3; its peptide SHPRH-146aa interacts with RUNX1 to increase NFKBIA expression, and NFKBIA knockdown attenuates the pro-apoptotic effect.
Biological pathway or process:

apoptosis (promotes); proliferation (inhibits); migration (inhibits); invasion (inhibits); other pathway/process (other)

Detected method:
Q
M
Validation methods:

Bioinformatics Analysis; RT-qPCR; Transfection; CCK8; Transwell Assay; Annexin V/PI Flow Cytometry; Western Blot; Microarray

Clinical significance:

-

Description:

circ-SHPRH is down-regulated in neuroblastoma samples/cell lines. Forced circ-SHPRH overexpression suppresses neuroblastoma malignant phenotypes and promotes apoptosis, accompanied by decreased Bcl-2 and increased Caspase-3, with a related SHPRH-146aa/RUNX1/NFKBIA regulatory circuit described in the study.

Confidence score:

0.5067

Other information
Title:

A peptide encoded by the circular form of the SHPRH gene induces apoptosis in neuroblastoma cells.

Journal: PeerJ
Published: 2024
PubMed ID: 38282862
Study type:

combined biological and clinical study

Data availability: GSE102285; Supplemental Files
Code availability: -