circRNA basic information
circBase ID: hsa_circ_0005939
Name: -
Synonym: -
Host Gene: -
Genomic location(hg19): chr7:156619298-156629579:-
Genomic location(hg38): chr7:156826604-156836885:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: Colorectal cancer
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

CRC tissues; noncancerous tissues; adjacent non-tumor tissue samples

Cell lines:

NCM-460; HCT116; SW480; HT29

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: UHRF1BP1L, UHRF1BP1L mRNA, UHRF1BP1L protein
Associated microRNA: miR-4693-3p
Biological function: Promotes malignant phenotypes of CRC cells, including cell proliferation and colony formation, inhibits apoptosis, and supports cell cycle progression; its up-regulation is associated with CRC occurrence and lymph node metastasis.
Molecular mechanism: hsa_circ_0005939 functions as a ceRNA by sponging miR-4693-3p, thereby enhancing UHRF1BP1L expression in CRC cells.
Biological pathway or process:

proliferation (promotes); apoptosis (inhibits); cell cycle (promotes); ceRNA regulation (other); metastasis (promotes)

Detected method:
Q
S
Validation methods:

circRNA-seq; RT-qPCR; Clinical Sample Validation; Bioinformatics Analysis; Transfection; CCK8; Colony Formation Assay; Wound Healing Assay; Annexin V/PI Flow Cytometry; Cell Cycle Assay; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Luciferase Reporter Assay; Western Blot

Clinical significance:

Up-regulation of hsa_circ_0005939 was associated with CRC occurrence and the number of lymph node metastases, and it may be a promising biomarker and therapeutic target for CRC.

Description:

hsa_circ_0005939 is up-regulated in colorectal cancer tissues and cells. It promotes CRC malignant phenotypes by enhancing proliferation and cell cycle progression and inhibiting apoptosis. Mechanistically, it mainly functions as a cytoplasmic ceRNA that sponges miR-4693-3p to increase UHRF1BP1L expression, suggesting potential clinical value as a therapeutic target.

Confidence score:

0.7534

Other information
Title:

Circular RNA hsa_circ_0005939 Regulates UHRF1BP1L Expression by Targeting miR-4693-3p to Promote Colorectal Cancer Progression.

Journal: Protein and peptide letters
Published: 2024
PubMed ID: 38918974
Study type:

combined biological and clinical study

Data availability: The data and supportive information are available within the article.
Code availability: -