circRNA basic information
circBase ID: hsa_circ_0016242
Name: hsa_circ_RASSF5
Synonym: circRASSF5
Host Gene: RASSF5
Genomic location(hg19): chr1:206711500-206758627:+
Genomic location(hg38): chr1:206538171-206585295:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma / HCC
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

tumor tissues; matched adjacent nontumorous tissues

Cell lines:

HepG2; Huh7; SMMC-772; MHCC-97H; Hep3B; L02; HEK293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: PHLPP1, PHLPP2
Associated microRNA: miR-331-3p
Biological function: Suppresses proliferation, migration, invasion and metastasis; inhibits HCC tumor growth in vivo
Molecular mechanism: Acts as a ceRNA sponge for miR-331-3p, thereby increasing PHLPP1/PHLPP2 expression and restraining HCC progression
Biological pathway or process:

proliferation (inhibits); migration (inhibits); invasion (inhibits); metastasis (inhibits); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; FISH / smFISH; RNA Pull-Down; Luciferase Reporter Assay; Transfection; CCK8; EdU Staining; Wound Healing Assay; Transwell Assay; Western Blot; IHC (Immunohistochemistry); In Vivo Animal Model; H&E Staining; Clinical Sample Validation; Survival Analysis; Bioinformatics Analysis

Clinical significance:

Low circRASSF5 expression is associated with larger tumor size, vascular invasion, portal vein tumor thrombus and unfavorable prognosis; lower circRASSF5 correlates with poorer OS and RFS

Description:

circRASSF5 is down-regulated in HCC and functions as a tumor suppressor by inhibiting proliferation, migration, invasion and metastasis in vitro and in xenograft models. It mainly localizes to the cytoplasm and acts as a ceRNA sponge for miR-331-3p, thereby increasing PHLPP1/PHLPP2 expression. Low circRASSF5 is associated with aggressive clinicopathologic features and poorer survival.

Confidence score:

0.8596

Other information
Title:

Circular RNA circRASSF5 Functions as an Anti-Oncogenic Factor in Hepatocellular Carcinoma by Acting as a Competitive Endogenous RNA Through Sponging miR-331-3p.

Journal: Journal of hepatocellular carcinoma
Published: 2022
PubMed ID: 36217445
Study type:

combined biological and clinical study

Data availability: -
Code availability: -