circRNA basic information
circBase ID: hsa_circ_0006324
Name: hsa_circ_DENND1B
Synonym: circ_0006324
Host Gene: DENND1B
Genomic location(hg19): chr1:197611840-197627499:-
Genomic location(hg38): chr1:197642710-197658369:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005233
MONDO name: non-small cell lung carcinoma
Disease details: non-small cell lung cancer
Disease DO ID:
3908
Disease MeSH ID:
D002289
Disease NCIt ID:
C2926
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

primary tumors; paired normal lung tissues; adjacent normal tissues; mice tumor tissue

Cell lines:

A549; H1975; H522; HCC827; BEAS-2B

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: TRIM59, CyclinD1, C-caspase3, GLUT1, LDHA, Ki67
Associated microRNA: miR-496
Biological function: Circ_0006324 functions as a tumor promoter in NSCLC, promoting cell proliferation, cell-cycle progression, glycolysis and tumor growth, while inhibiting apoptosis.
Molecular mechanism: Circ_0006324 acts as a miR-496 sponge to positively regulate TRIM59 expression, thereby promoting NSCLC cell growth and glycolysis.
Biological pathway or process:

proliferation (promotes); cell cycle (promotes); apoptosis (inhibits); glycolysis (promotes); ceRNA regulation (other)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Transfection; MTT; EdU Staining; Annexin V/PI Flow Cytometry; Cell Cycle Assay; Western Blot; RNA Pull-Down; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); IHC (Immunohistochemistry); In Vivo Animal Model; Bioinformatics Analysis

Clinical significance:

Circ_0006324 was upregulated in NSCLC and related to tumor node metastasis stage and distant metastasis; it might provide a novel target and biomarker for NSCLC therapy.

Description:

Circ_0006324 is upregulated in NSCLC tissues and cells and is associated with advanced TNM stage and distant metastasis. Functionally, it promotes NSCLC cell proliferation, cell-cycle progression, glycolysis and in vivo tumor growth while suppressing apoptosis. Mechanistically, circ_0006324 acts through the miR-496/TRIM59 axis, functioning as a miR-496 sponge to increase TRIM59 expression.

Confidence score:

0.8324

Other information
Title:

Circ_0006324 regulates cell proliferation, cell-cycle progression, apoptosis, and glycolysis of non-small cell lung cancer cells through miR-496/TRIM59 axis.

Journal: Journal of biochemical and molecular toxicology
Published: 2023
PubMed ID: 37545326
Study type:

combined biological and clinical study

Data availability: The analyzed data sets generated during the present study are available from the corresponding author on reasonable request.
Code availability: -