circRNA basic information
circBase ID: hsa_circ_0001649
Name: hsa_circ_SHPRH
Synonym: -
Host Gene: SHPRH
Genomic location(hg19): chr6:146209155-146216113:-
Genomic location(hg38): chr6:145888019-145894977:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0021042
MONDO name: glioma
Disease details: glioma
Disease DO ID:
-
Disease MeSH ID:
D005910
Disease NCIt ID:
C3059
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

glioma tissue specimens; matched adjacent non-tumorous tissue specimens; xenograft tumor tissues

Cell lines:

U251; U118; LN229; U87MG; NHA

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: Bcl-2, caspase-3, caspase-9, Bax
Associated microRNA: -
Biological function: Inhibits glioma cell growth, proliferation, clonogenic capacity and tumor growth in vivo, and facilitates glioma cell apoptosis.
Molecular mechanism: hsa_circ_0001649 facilitates apoptosis partly through regulation of the Bcl-2/caspase-3 pathway, activating caspase-3/caspase-9, suppressing Bcl-2 and increasing Bax expression.
Biological pathway or process:

apoptosis (promotes); proliferation (inhibits); other pathway/process (other)

Detected method:
Q
Validation methods:

RT-qPCR; Clinical Sample Validation; Cohort Study; Survival Analysis; Transfection; CCK8; Colony Formation Assay; Annexin V/PI Flow Cytometry; Western Blot; In Vivo Animal Model; IHC (Immunohistochemistry)

Clinical significance:

Down-regulated hsa_circ_0001649 is linked to larger tumor size, advanced WHO grade, lower survival rate and may serve as an independent prognostic predictor for glioma patients after surgery.

Description:

hsa_circ_0001649 is down-regulated in glioma tissues and cell lines, and its decreased expression is associated with larger tumor size, advanced WHO grade and unfavorable overall survival. Functionally, restoring hsa_circ_0001649 suppresses glioma cell proliferation, colony formation and xenograft tumor growth while promoting apoptosis through the Bcl-2/caspase-3 pathway, supporting its role as a tumor-suppressive prognostic and therapeutic target.

Confidence score:

0.6736

Other information
Title:

Decreased circular RNA hsa_circ_0001649 predicts unfavorable prognosis in glioma and exerts oncogenic properties in vitro and in vivo.

Journal: Gene
Published: 2018
PubMed ID: 30016668
Study type:

combined biological and clinical study

Data availability: -
Code availability: -