circRNA basic information
circBase ID: hsa_circ_0105596
Name: hsa_circ_FTO
Synonym: hsa_Circ_0105596 / circFTO
Host Gene: FTO
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005180
MONDO name: Parkinson disease
Disease details: Parkinson's disease / PD
Disease DO ID:
14330
Disease MeSH ID:
D010300
Disease NCIt ID:
C26845
Disease ICD11 ID:
296066191
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

substantia nigra (SN) tissue

Cell lines:

SH-SY5Y

In vivo animal model:

other disease animal model

circRNA-disease information
Expression pattern:
UP
Associated gene: EEF2
Associated microRNA: miR-187-3p
Biological function: Promotes Parkinson's disease progression and neuronal apoptosis; increases oxidative stress and inflammatory factors; knockdown alleviates symptoms.
Molecular mechanism: Acts as a ceRNA to sponge miR-187-3p, releasing repression of EEF2; validated by Ago2-RIP and dual-luciferase reporter assays.
Biological pathway or process:

ceRNA regulation (promotes); apoptosis (promotes); inflammation (promotes); mitochondrial function (inhibits)

Detected method:
Q
S
Validation methods:

Bioinformatics Analysis; RNA-seq; RT-qPCR; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; Lentiviral Transduction; Annexin V/PI Flow Cytometry; Western Blot; ELISA; IHC (Immunohistochemistry); H&E Staining; TUNEL; In Vivo Animal Model

Clinical significance:

Circulating circFTO levels may be used as an early diagnostic biomarker to assess PD risk level and disease severity.

Description:

circFTO (Hsa_Circ_0105596) is up-regulated in Parkinson's disease and promotes disease-associated neuronal injury. Mechanistically, it sponges miR-187-3p, weakening miR-187-3p-mediated repression of EEF2, thereby enhancing apoptosis and oxidative/inflammatory stress; circFTO knockdown alleviates PD phenotypes in 6-OHDA models.

Confidence score:

0.7302

Other information
Title:

Hsa_Circ_0105596/FTO inhibits progression of Parkinson's disease by sponging miR-187-3p and regulating eEF2.

Journal: Heliyon
Published: 2024
PubMed ID: 39654770
Study type:

combined biological and clinical study

Data availability: GSE20146; GSE20295; GSE23290; GSE28894; GSE54282; GSE20141; GSE20163; GSE20164; GSE24378; GSE26927; GSE42966; GSE49036; GSE7621; GSE133101; GSE110719; GSE157783; https://www.ncbi.nlm.nih.gov/geo/; http://www.biomedical-web.com/circmine/; https://starbase.sysu.edu.cn/; https://doi.org/10.1016/j.heliyon.2024.e39830
Code availability: -