circRNA basic information
circBase ID: hsa_circ_0081001
Name: hsa_circ_CYP51A1
Synonym: -
Host Gene: CYP51A1
Genomic location(hg19): chr7:91755566-91756945:-
Genomic location(hg38): chr7:92126252-92127631:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0009807
MONDO name: osteosarcoma
Disease details: osteosarcoma
Disease DO ID:
3347
Disease MeSH ID:
D012516
Disease NCIt ID:
C9145
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

OS tissues; non-tumor tissues; sensitive tissues; resistant tissues; tumor tissues

Cell lines:

U2OS; HOS; U2OS/R; HOS/R

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: TGM2
Associated microRNA: miR-494-3p
Biological function: promotes MTX resistance, cell viability, migration and invasion; inhibits apoptosis; knockdown enhances MTX sensitivity and suppresses tumor growth
Molecular mechanism: ceRNA sponge: circ_0081001 sponges miR-494-3p to upregulate TGM2
Biological pathway or process:

apoptosis (inhibits); migration (promotes); invasion (promotes); metastasis (promotes); chemoresistance (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Nuclear-Cytoplasmic Fractionation; Transfection; CCK8; Annexin V/PI Flow Cytometry; Transwell Assay; Western Blot; Luciferase Reporter Assay; In Vivo Animal Model; Clinical Sample Validation; Survival Analysis; ROC Analysis; Bioinformatics Analysis

Clinical significance:

higher in MTX-resistant patients and distinguishes sensitive vs resistant tissues (ROC AUC 0.7796); high expression associated with poor survival

Description:

circ_0081001 is up-regulated in osteosarcoma, especially in MTX-resistant tissues/cells, and high expression predicts poor survival. It promotes MTX resistance and malignant phenotypes by acting as a ceRNA sponge for miR-494-3p, thereby increasing TGM2 expression; circ_0081001 knockdown enhances MTX sensitivity in vitro and in xenograft tumors.

Confidence score:

0.8066

Other information
Title:

Circular RNA circ_0081001 knockdown enhances methotrexate sensitivity in osteosarcoma cells by regulating miR-494-3p/TGM2 axis.

Journal: Journal of orthopaedic surgery and research
Published: 2021
PubMed ID: 33435987
Study type:

combined biological and clinical study

Data availability: -
Code availability: -