circRNA basic information
circBase ID: hsa_circ_0079284
Name: hsa_circ_RNF216
Synonym: circRNF216 / circ-RNF216
Host Gene: RNF216
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer / CRC
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

CRC tissues; adjacent normal tissue samples; lung; tumor tissue

Cell lines:

SW620; SW480; HCT116; HT-29; DLD1; CT26; FHC

In vivo animal model:

cell line-derived xenograft; syngeneic model

circRNA-disease information
Expression pattern:
DN
Associated gene: ZC3H12C, N-cadherin, AGO2, CD8+ T cells
Associated microRNA: miR-576-5p
Biological function: Inhibits CRC metastasis/migration/invasion; downregulates N-cadherin; enhances CD8+ T cell infiltration and CD8+ T cell proliferation; suppresses tumor growth in vivo.
Molecular mechanism: ceRNA sponge of miR-576-5p to relieve repression of ZC3H12C, leading to reduced N-cadherin; associated with AGO2/RISC binding and cytoplasmic co-localization with miR-576-5p.
Biological pathway or process:

ceRNA regulation (promotes); migration (inhibits); invasion (inhibits); metastasis (inhibits); EMT (inhibits); immune regulation (promotes)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; Transfection; Western Blot; Transwell Assay; Wound Healing Assay; RIP (RNA Immunoprecipitation); FISH / smFISH; Luciferase Reporter Assay; Clinical Sample Validation; Survival Analysis; In Vivo Animal Model; H&E Staining; IHC (Immunohistochemistry); Flow Cytometry(Non-apoptosis/cycle); CCK8; ELISA; Bioinformatics Analysis

Clinical significance:

Low expression of circRNF216 is associated with lower overall survival in CRC; proposed as a potential biomarker/diagnostic marker and therapeutic target.

Description:

circRNF216 (RNF216-derived exonic circRNA) is down-regulated in colorectal cancer and acts as a tumor suppressor. It sponges miR-576-5p to de-repress ZC3H12C, leading to reduced N-cadherin and inhibited migration/invasion/metastasis, and it also enhances CD8+ T-cell infiltration/proliferation via ZC3H12C, supporting potential diagnostic/therapeutic value.

Confidence score:

0.8684

Other information
Title:

Regulation of tumor metastasis and CD8+ T cells infiltration by circRNF216/miR-576-5p/ZC3H12C axis in colorectal cancer.

Journal: Cellular & molecular biology letters
Published: 2024
PubMed ID: 38267865
Study type:

combined biological and clinical study

Data availability: 10.1186/s11658-024-00539-z
Code availability: -