circRNA basic information
circBase ID: hsa_circ_0045015
Name: hsa_circ_BRIP1
Synonym: circ-BRIP1 / circ_0045015
Host Gene: BRIP1
Genomic location(hg19): chr17:59853761-59853923:-
Genomic location(hg38): chr17:61776400-61776562:-
Subcellular localization: nucleus and cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0011719
MONDO name: gastrointestinal stromal tumor
Disease details: Gastrointestinal stromal tumor / GIST
Disease DO ID:
9253
Disease MeSH ID:
D046152
Disease NCIt ID:
C3868
Disease ICD11 ID:
-
Disease OMIM ID:
606764
Species: Human
Species details: Homo sapiens
Tissue specimen:

GIST tumor tissue; FFPE tissue microarrays (TMAs)

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: BRIP1
Associated microRNA: -
Biological function: associated with imatinib resistance, tumor relapse and progression, and metastasis
Molecular mechanism: not specified
Biological pathway or process:

not specified

Detected method:
Q
H
M
Validation methods:

Microarray; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; ISH (In Situ Hybridization); Clinical Sample Validation; Survival Analysis; ROC Analysis; Bioinformatics Analysis

Clinical significance:

diagnostic biomarker for distinguishing imatinib-naïve tumors from imatinib-resistant tumor tissues (ROC AUC 0.759); high expression associated with shorter survival

Description:

circ-BRIP1 (circ_0045015) is upregulated in imatinib-resistant GIST tissues and correlates with resistance and aggressive clinical features (relapse/progression/metastasis). ISH shows nucleus/cytoplasm positivity in malignant tumor cells, and high circ-BRIP1 expression is associated with worse survival.

Confidence score:

0.7277

Other information
Title:

RNA profiling and immunohistochemistry analyses of circRNAs in imatinib-resistant gastrointestinal stromal tumors.

Journal: Journal of translational medicine
Published: 2025
PubMed ID: 40448136
Study type:

combined biological and clinical study

Data availability: GSE188700
Code availability: -