circRNA basic information
circBase ID: hsa_circ_0003146
Name: hsa_circ_EHD2
Synonym: circ_0003146
Host Gene: EHD2
Genomic location(hg19): chr19:48229068-48229481:+
Genomic location(hg38): chr19:47725811-47726224:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005005
MONDO name: clear cell renal carcinoma
Disease details: clear cell renal cell carcinoma / ccRCC
Disease DO ID:
4467
Disease MeSH ID:
-
Disease NCIt ID:
C4033
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

tumor tissues; normal controls; tumor tissues

Cell lines:

786-O; caKi-1; A498; 769P; HK-2; HEK293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: SCARB1
Associated microRNA: miR-1272
Biological function: Promotes ccRCC cell proliferation, migration, invasion, EMT and tumor growth in vivo, while inhibiting apoptosis.
Molecular mechanism: circ_0003146 acts as a miR-1272 sponge to upregulate SCARB1 expression, thereby promoting malignant progression of ccRCC.
Biological pathway or process:

proliferation (promotes); apoptosis (inhibits); migration (promotes); invasion (promotes); metastasis (promotes); EMT (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RNase R Treatment; RT-qPCR; Clinical Sample Validation; Nuclear-Cytoplasmic Fractionation; Transfection; EdU Staining; CCK8; Western Blot; Annexin V/PI Flow Cytometry; Wound Healing Assay; Transwell Assay; In Vivo Animal Model; IHC (Immunohistochemistry); Luciferase Reporter Assay; Bioinformatics Analysis

Clinical significance:

Circ_0003146 is promising to be a molecular target for ccRCC diagnosis and treatment.

Description:

circ_0003146 is up-regulated in ccRCC tissues and cells and functions as an oncogenic circRNA. It promotes proliferation, migration, invasion, EMT and xenograft tumor growth while suppressing apoptosis, mainly through the circ_0003146/miR-1272/SCARB1 ceRNA axis. The study suggests circ_0003146 may be a molecular target for ccRCC diagnosis and treatment.

Confidence score:

0.786

Other information
Title:

Circ_0003146 upregulates SCARB1 expression by acting as a miR-1272 sponge to promote malignant behaviors of clear cell renal cell carcinoma.

Journal: Anti-cancer drugs
Published: 2022
PubMed ID: 35276698
Study type:

combined biological and clinical study

Data availability: -
Code availability: -