circRNA basic information
circBase ID: -
Name: hsa_circ_RERE
Synonym: circRERE(Chr 1: 8,541,214-8,614,686)
Host Gene: RERE
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
 0007254
MONDO name: breast cancer
Disease details: primary breast cancer
Disease DO ID:
 1612
Disease MeSH ID:
 -
Disease NCIt ID:
 C9335
Disease ICD11 ID:
 1047754165
Disease OMIM ID:
 -
Species: Human
Species details: Homo sapiens
Tissue specimen:

primary breast tumors
Cell lines:

-
In vivo animal model:

-
circRNA-disease information
Expression pattern:
UN
Associated gene: -
Associated microRNA: -
Biological function: Potentially associated with highly proliferative tumors (as part of differentially expressed circRNAs list).
Molecular mechanism: not specified
Biological pathway or process:

proliferation (other)
Detected method:
Q
S
Validation methods:

RNA-seq; Back-Splice Junction PCR / divergent primers PCR; Clinical Sample Validation
Clinical significance:

-
Description:

circRERE was detected in primary breast cancer RNA-seq data and its presence was confirmed by RT-PCR in an independent pool of 100 breast tumors. It is mentioned among circRNAs differentially expressed in association with proliferative tumor characteristics, but the study does not provide a specific mechanism or clinical outcome analysis for circRERE in the provided text.
Confidence score:

0.429
Other information
Title:

The circular RNome of primary breast cancer.

Journal: Genome research
Published: 2019
PubMed ID: 30692147
Study type:

bioinformatics study
Data availability: EGAS00001001178
Code availability: -