circRNA basic information
circBase ID: hsa_circ_0006702
Name: hsa_circ_IARS
Synonym: circIARS
Host Gene: IARS
Genomic location(hg19): chr9:95018961-95032265:-
Genomic location(hg38): chr9:92256679-92269983:-
Subcellular localization: nucleus and cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005233
MONDO name: non-small cell lung carcinoma
Disease details: non-small cell lung cancer / NSCLC
Disease DO ID:
3908
Disease MeSH ID:
D002289
Disease NCIt ID:
C2926
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

plasma; cancer tissues; paracarcinoma tissues

Cell lines:

NCI-H1299; A549; HBEs

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: -
Associated microRNA: -
Biological function: Potential diagnostic biomarker for NSCLC and dynamic monitoring marker; associated with tumor progression and clinicopathological parameters.
Molecular mechanism: Subcellular localization suggests potential ceRNA (miRNA sponge) and RBP-interaction mechanisms; downstream miRNAs/RBPs and circRNA-miRNA-mRNA and circRNA-RBP networks were predicted by bioinformatics without experimental validation.
Biological pathway or process:

ceRNA regulation (other)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; Sanger Sequencing; RNase R Treatment; Actinomycin D / DRB Stability Assay; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis; Back-Splice Junction PCR / divergent primers PCR; In Vivo Animal Model; Cohort Study

Clinical significance:

circIARS is increased in NSCLC plasma/tissues and shows diagnostic performance (ROC AUC 0.778) superior to CEA, SCC and Cyfra21-1; decreases after chemotherapy/surgery and increases after recurrence for dynamic monitoring; high expression correlates with several clinicopathological parameters (e.g., TNM stage, metastasis).

Description:

circIARS (hsa_circ_0006702, from IARS) is up-regulated in NSCLC tissues and plasma and shows good diagnostic performance versus controls and other lung disease groups. Its level decreases after chemotherapy/surgery and increases after recurrence, supporting use for dynamic monitoring; mechanistically, it localizes to both nucleus and cytoplasm and is predicted (bioinformatically) to act via ceRNA and/or RBP-associated networks.

Confidence score:

0.7844

Other information
Title:

circIARS: a potential plasma biomarker for diagnosing non-small cell lung cancer.

Journal: Acta biochimica et biophysica Sinica
Published: 2024
PubMed ID: 38686459
Study type:

combined biological and clinical study

Data availability: Supplementary data is available at Acta Biochimica et Biphysica Sinica online.
Code availability: -