circRNA basic information
circBase ID: hsa_circ_0007380
Name: -
Synonym: -
Host Gene: -
Genomic location(hg19): chr5:6623326-6625782:-
Genomic location(hg38): chr5:6623213-6625669:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer / GC
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissue; adjacent normal mucosa; serum

Cell lines:

AGS

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DS
Associated gene: EIF4A3
Associated microRNA: -
Biological function: Circulating diagnostic biomarker component for GC within an 8-circRNA panel.
Molecular mechanism: Not experimentally established; discussed potential RBP (EIF4A3) interaction for most panel circRNAs.
Biological pathway or process:

not specified

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; RNase R Treatment; divergent primers PCR; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis

Clinical significance:

Included in 8-circRNA diagnostic model for GC (training AUC 0.87; validation AUC 0.83).

Description:

hsa_circ_0007380 is part of the final 8-circRNA serum diagnostic panel for gastric cancer and contributes to a logistic regression risk model distinguishing GC from controls in training and validation cohorts. Post-surgery decreases for most markers support tumor specificity at the panel level.

Confidence score:

0.6556

Other information
Title:

Diagnostic efficacy of circular RNAs as noninvasive, liquid biopsy biomarkers for early detection of gastric cancer.

Journal: Molecular cancer
Published: 2022
PubMed ID: 35139874
Study type:

combined biological and clinical study

Data availability: GSE89143; GSE83521
Code availability: -