circRNA basic information
circBase ID: hsa_circ_0031250
Name: hsa_circ_PRMT5
Synonym: circ-PRMT5
Host Gene: PRMT5
Genomic location(hg19): chr14:23395341-23396023:-
Genomic location(hg38): chr14:22926132-22926814:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005233
MONDO name: non-small cell lung carcinoma
Disease details: non-small cell lung cancer / NSCLC
Disease DO ID:
3908
Disease MeSH ID:
D002289
Disease NCIt ID:
C2926
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

cancer tissues; adjacent normal tissues; NSCLC tissues; paracarcinoma normal tissues; subcutaneous tumors

Cell lines:

HBE; A549; 95-D; HCC827; H1299; SK-MES-1

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: EZH2
Associated microRNA: miR-377, miR-382, miR-498
Biological function: Promotes NSCLC cell proliferation, cell cycle progression, tumor growth and tumorigenicity; high expression is associated with larger tumor size, lymph node metastasis, later clinical TNM stage and worse prognosis.
Molecular mechanism: circ-PRMT5 acts as a cytoplasmic miRNA sponge for miR-377, miR-382 and miR-498, relieving their repression of EZH2 and increasing EZH2 expression to promote NSCLC growth.
Biological pathway or process:

proliferation (promotes); cell cycle (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; RT-qPCR; Microarray; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; RNA Pull-Down; Luciferase Reporter Assay; Transfection; CCK8; EdU Staining; Colony Formation Assay; Cell Cycle Assay; In Vivo Animal Model; Western Blot; IHC (Immunohistochemistry); Cohort Study; Survival Analysis; Bioinformatics Analysis

Clinical significance:

High circ-PRMT5 expression is positively correlated with larger tumor size, advanced clinical stage, lymph node metastasis, poor overall survival and poor progression-free survival; circ-PRMT5 is an independent prognostic factor and may be a promising prognostic biomarker for NSCLC patients.

Description:

circ-PRMT5 is up-regulated in NSCLC tissues and cell lines and is associated with aggressive clinicopathological features and poor survival. It promotes NSCLC proliferation and xenograft tumor growth by sponging miR-377, miR-382 and miR-498, thereby upregulating EZH2. The study supports circ-PRMT5 as an oncogenic circRNA and potential prognostic biomarker in NSCLC.

Confidence score:

0.8823

Other information
Title:

Circular RNA circ-PRMT5 facilitates non-small cell lung cancer proliferation through upregulating EZH2 via sponging miR-377/382/498.

Journal: Gene
Published: 2019
PubMed ID: 31479715
Study type:

combined biological and clinical study

Data availability: GSE112214; Supplementary data at https://doi.org/10.1016/j.gene.2019.144099
Code availability: -