circRNA basic information
circBase ID: hsa_circ_0046599
Name: -
Synonym: circ_0046599
Host Gene: -
Genomic location(hg19): chr17:80962990-80972395:-
Genomic location(hg38): chr17:83005114-83014519:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tissues; adjacent normal tissues

Cell lines:

HCCLM3; Huh7; THLE-2

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: RPN2
Associated microRNA: miR-1258
Biological function: promotes HCC cell proliferation, migration, invasion and glycolysis; promotes tumor growth in vivo
Molecular mechanism: ceRNA mechanism: circ_0046599 sponges miR-1258 to increase RPN2 expression
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); glycolysis (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; Nuclear-Cytoplasmic Fractionation; RNase R Treatment; Clinical Sample Validation; Survival Analysis; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Transfection; CCK8; Colony Formation Assay; Wound Healing Assay; Transwell Assay; Western Blot; In Vivo Animal Model; Bioinformatics Analysis

Clinical significance:

HCC patients with high circ_0046599 expression had lower overall survival than those with low circ_0046599 expression

Description:

circ_0046599 is up-regulated in HCC tissues and cell lines and is mainly localized in the cytoplasm. It promotes HCC malignant phenotypes (proliferation, migration/invasion and glycolysis) and tumor growth by sponging miR-1258 to increase RPN2 expression.

Confidence score:

0.8174

Other information
Title:

Circ_0046599 Promotes the Development of Hepatocellular Carcinoma by Regulating the miR-1258/RPN2 Network.

Journal: Cancer management and research
Published: 2020
PubMed ID: 32801909
Study type:

combined biological and clinical study

Data availability: GSE97332
Code availability: -