circRNA basic information
circBase ID: -
Name: hsa_circ_CDR1
Synonym: CDR1as (ciRS-7) / CDR1as
Host Gene: CDR1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: nucleus and cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: Gastric cancer / GC
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissues; adjacent normal tissues; subcutaneous tumor tissues

Cell lines:

HGC-27; SGC-7901; BGC-823; MGC-803; AGS; MKN-45

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UN
Associated gene: TGIF1, HuR, AGO2, PCNA, Cyclin D1, Bax, Bcl-2, Caspase-3, Caspase-9
Associated microRNA: miR-299-3p
Biological function: promotes GC cell proliferation and viability and suppresses apoptosis; promotes tumor growth in vivo
Molecular mechanism: CDR1as acts as a cytoplasmic miR-299-3p sponge to relieve suppression of TGIF1; HuR binds CDR1as (via RRM2) and positively regulates CDR1as level and downstream TGIF1, affecting PCNA and Bax
Biological pathway or process:

proliferation (promotes); apoptosis (inhibits); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; Nuclear-Cytoplasmic Fractionation; FISH / smFISH; RIP (RNA Immunoprecipitation); RNA Pull-Down; Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; Annexin V/PI Flow Cytometry; Western Blot; In Vivo Animal Model; H&E Staining; IHC (Immunohistochemistry)

Clinical significance:

could be used as a new therapeutic target for GC

Description:

In gastric cancer, CDR1as functions as an oncogenic circRNA that enhances proliferation/viability and suppresses apoptosis in vitro and in cell line-derived xenograft tumors. Mechanistically, it acts as a ceRNA sponging miR-299-3p to de-repress TGIF1, while the RBP HuR binds CDR1as and increases its level, strengthening the HuR/CDR1as/miR-299-3p/TGIF1 axis.

Confidence score:

0.7456

Other information
Title:

Circular RNA CDR1as Mediated by Human Antigen R (HuR) Promotes Gastric Cancer Growth via miR-299-3p/TGIF1 Axis.

Journal: Cancers
Published: 2023
PubMed ID: 38067260
Study type:

combined biological and clinical study

Data availability: All data supporting the findings of this study are available within the article, its Supplementary Files and from the corresponding author upon reasonable request.
Code availability: -