circRNA basic information
circBase ID: hsa_circ_0001564
Name: hsa_circ_CANX
Synonym: circ-CANX
Host Gene: CANX
Genomic location(hg19): chr5:179132679-179137066:+
Genomic location(hg38): chr5:179705678-179710065:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0009807
MONDO name: osteosarcoma
Disease details: osteosarcoma / OS
Disease DO ID:
3347
Disease MeSH ID:
D012516
Disease NCIt ID:
C9145
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

human primary osteosarcoma samples; paired adjacent noncancerous tissue samples; tumor tissue; adjacent tissue

Cell lines:

U2OS; Saos-2; HOS; MG-63; NHOst

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: -
Associated microRNA: miR-29c-3p
Biological function: hsa_circ_0001564 promotes osteosarcoma tumorigenicity by enhancing proliferation and colony formation, facilitating cell cycle progression, and inhibiting apoptosis; knockdown suppresses proliferation, induces G0/G1 cell cycle arrest, and promotes apoptosis in HOS and MG-63 cells.
Molecular mechanism: hsa_circ_0001564 acts as a miR-29c-3p sponge and exerts oncogenic effects in osteosarcoma through a competing endogenous RNA mechanism.
Biological pathway or process:

proliferation (promotes); cell cycle (promotes); apoptosis (inhibits); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

RNase R Treatment; RT-qPCR; Microarray; Clinical Sample Validation; Luciferase Reporter Assay; Bioinformatics Analysis; Transfection; CCK8; Colony Formation Assay; Annexin V/PI Flow Cytometry; Cell Cycle Assay

Clinical significance:

hsa_circ_0001564 could act as a potential biomarker and therapeutic target for osteosarcoma.

Description:

hsa_circ_0001564 is up-regulated in osteosarcoma tissues and cell lines and functions as an oncogenic circRNA. Its knockdown suppresses proliferation and colony formation, induces G0/G1 cell cycle arrest, and promotes apoptosis, at least partly by sponging miR-29c-3p. The study suggests hsa_circ_0001564 may serve as a potential biomarker and therapeutic target for osteosarcoma.

Confidence score:

0.7404

Other information
Title:

Circular RNA hsa_circ_0001564 regulates osteosarcoma proliferation and apoptosis by acting miRNA sponge.

Journal: Biochemical and biophysical research communications
Published: 2018
PubMed ID: 29229385
Study type:

combined biological and clinical study

Data availability: -
Code availability: -