circRNA basic information
circBase ID: hsa_circ_0003489
Name: hsa_circ_CDK8
Synonym: -
Host Gene: CDK8
Genomic location(hg19): chr13:26974589-26975761:+
Genomic location(hg38): chr13:26400452-26401624:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005233
MONDO name: non-small cell lung carcinoma
Disease details: non-small cell lung cancer / NSCLC
Disease DO ID:
3908
Disease MeSH ID:
D002289
Disease NCIt ID:
C2926
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

NSCLC tissue samples; PTX-sensitive NSCLC tissues; PTX-resistant NSCLC tissues

Cell lines:

A549; H460; HBE; A549/PTX; H460/PTX; 293T

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: IGF2, Ago2
Associated microRNA: miR-98-5p
Biological function: promotes paclitaxel resistance (chemoresistance) and cell growth in PTX-resistant NSCLC cells; its knockdown enhances PTX sensitivity
Molecular mechanism: acts as a miRNA sponge for miR-98-5p to increase IGF2 expression, thereby promoting PTX resistance
Biological pathway or process:

chemoresistance (promotes); proliferation (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Transfection; MTT; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Clinical Sample Validation; Bioinformatics Analysis

Clinical significance:

hsa_circ_0003489 levels are associated with tumor size, TNM stages, distant metastasis or recurrence, and lymph nodes metastasis in NSCLC patients

Description:

hsa_circ_0003489 is up-regulated in paclitaxel-resistant NSCLC tissues and resistant cell models. Silencing hsa_circ_0003489 reduces PTX IC50 and inhibits cell growth by sponging miR-98-5p and downregulating IGF2, indicating a ceRNA axis that promotes chemoresistance.

Confidence score:

0.7688

Other information
Title:

Hsa_circ_0003489 Drives PTX Resistance of Human NSCLC Cells Through Modulating miR-98-5p/IGF2.

Journal: Pharmacogenomics and personalized medicine
Published: 2023
PubMed ID: 37692338
Study type:

combined biological and clinical study

Data availability: -
Code availability: -