circRNA basic information
circBase ID: hsa_circ_0041555
Name: hsa_circ_UBE2G1
Synonym: circUBE2G1
Host Gene: UBE2G1
Genomic location(hg19): chr17:4192524-4200109:-
Genomic location(hg38): chr17:4289229-4296814:-
Subcellular localization: nucleus
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005061
MONDO name: lung adenocarcinoma
Disease details: lung adenocarcinoma / LUAD
Disease DO ID:
3910
Disease MeSH ID:
C538231
Disease NCIt ID:
C3512
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

tumor tissues; adjacent tissues; metastatic lymph nodes

Cell lines:

A549; H1975; HLECs

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: hnRNPU, VEGF-C, H3K27ac
Associated microRNA: -
Biological function: Promotes lymphangiogenesis and lymph node metastasis in LUAD.
Molecular mechanism: circUBE2G1 binds hnRNPU and recruits it to the VEGF-C promoter to enhance H3K27ac, activating VEGF-C transcription and increasing VEGF-C secretion.
Biological pathway or process:

angiogenesis (promotes); metastasis (promotes); migration (promotes); proliferation (promotes); ceRNA regulation (other)

Detected method:
Q
H
S
Validation methods:

RNA-seq; RT-qPCR; Clinical Sample Validation; FISH / smFISH; divergent primers PCR; Sanger Sequencing; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; Transfection; RNA Pull-Down; Western Blot; RIP (RNA Immunoprecipitation); ChIP / ChIP-seq; Luciferase Reporter Assay; Tube Formation Assay; Transwell Assay; In Vivo Animal Model; IHC (Immunohistochemistry); ELISA; Survival Analysis; Bioinformatics Analysis

Clinical significance:

High circUBE2G1 expression is associated with LN metastasis and poorer OS and DFS in patients with LUAD.

Description:

circUBE2G1 (hsa_circ_0041555) is upregulated in LUAD and is associated with lymph node metastasis and poor survival. It predominantly localizes to the nucleus and promotes lymphangiogenesis and LN metastasis by binding hnRNPU and recruiting it to the VEGF-C promoter to increase H3K27ac and activate VEGF-C transcription/secretion.

Confidence score:

0.897

Other information
Title:

circUBE2G1 interacts with hnRNPU to promote VEGF-C-mediated lymph node metastasis of lung adenocarcinoma.

Journal: Frontiers in oncology
Published: 2024
PubMed ID: 39664183
Study type:

combined biological and clinical study

Data availability: GSE101586; GSE101684; https://www.frontiersin.org/articles/10.3389/fonc.2024.1455909/full#supplementary-material
Code availability: -