circRNA basic information
circBase ID: -
Name: hsa_circ_ODC1
Synonym: circ_ODC1
Host Gene: ODC1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0008380
MONDO name: retinoblastoma
Disease details: retinoblastoma / RB
Disease DO ID:
768
Disease MeSH ID:
D012175
Disease NCIt ID:
C7541
Disease ICD11 ID:
1855353671
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

RB samples; nontumor retina samples; RB tissues; normal tissues

Cell lines:

ARPE-19; Y79; WERI-Rb1; SO-Rb50; HXO-RB44

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: SKP2
Associated microRNA: miR-422a
Biological function: circ_ODC1 promotes RB cell growth and proliferation; circ_ODC1 silencing suppresses RB cell proliferation, and SKP2 overexpression partly restores the attenuated cell growth.
Molecular mechanism: circ_ODC1 acts as a sponge for miR-422a and increases SKP2 expression, thereby promoting RB cell growth.
Biological pathway or process:

proliferation (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; Clinical Sample Validation; Nuclear-Cytoplasmic Fractionation; Luciferase Reporter Assay; Bioinformatics Analysis; Transfection; CCK8; Colony Formation Assay; EdU Staining; Western Blot

Clinical significance:

The study suggests circ_ODC1/SKP2-related findings might help reveal novel prognostic factors and therapeutic targets for RB, but no direct clinical prognostic or diagnostic association for circ_ODC1 was validated.

Description:

circ_ODC1 is up-regulated in retinoblastoma tissues and cell lines. It predominantly localizes in the cytoplasm, sponges miR-422a, and thereby increases SKP2 expression to promote RB cell proliferation. Silencing circ_ODC1 increases miR-422a and suppresses RB cell growth, while SKP2 overexpression partly rescues this effect.

Confidence score:

0.6815

Other information
Title:

SKP2, positively regulated by circ_ODC1/miR-422a axis, promotes the proliferation of retinoblastoma.

Journal: Journal of cellular biochemistry
Published: 2020
PubMed ID: 31297892
Study type:

combined biological and clinical study

Data availability: -
Code availability: -