circRNA basic information
circBase ID: -
Name: hsa_circ_GRAMD1B
Synonym: circGRAMD1B
Host Gene: GRAMD1B
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005061
MONDO name: lung adenocarcinoma
Disease details: lung adenocarcinoma / LUAD
Disease DO ID:
3910
Disease MeSH ID:
C538231
Disease NCIt ID:
C3512
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

NSCLC tissue samples; corresponding adjacent tissues; tumor tissues

Cell lines:

Beas-2B; H1975; H1395; H1299; H441

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: SOX4, MEX3A, PI3K/AKT pathway
Associated microRNA: miR-4428
Biological function: circGRAMD1B promotes migration, invasion, and epithelial-mesenchymal transition of LUAD cells.
Molecular mechanism: circGRAMD1B acts as a ceRNA by sponging miR-4428 to upregulate SOX4; SOX4 transcriptionally activates MEX3A, thereby activating the PI3K/AKT pathway.
Biological pathway or process:

PI3K/AKT (promotes); migration (promotes); invasion (promotes); EMT (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

RNase R Treatment; Actinomycin D / DRB Stability Assay; RT-qPCR; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; RIP (RNA Immunoprecipitation); RNA Pull-Down; Luciferase Reporter Assay; ChIP / ChIP-seq; Transfection; Transwell Assay; Wound Healing Assay; IF (Immunofluorescence); Western Blot; Bioinformatics Analysis

Clinical significance:

The authors suggest circGRAMD1B might offer a novel biomarker for LUAD clinical therapies, but no clinical samples were involved.

Description:

circGRAMD1B is up-regulated in LUAD cells and functions as an oncogenic circRNA that promotes LUAD cell migration, invasion, and EMT. Mechanistically, cytoplasmic circGRAMD1B sponges miR-4428 to increase SOX4 expression, leading to SOX4-mediated transcriptional activation of MEX3A and activation of the PI3K/AKT pathway.

Confidence score:

0.7986

Other information
Title:

circGRAMD1B contributes to migration, invasion and epithelial-mesenchymal transition of lung adenocarcinoma cells via modulating the expression of SOX4.

Journal: Functional & integrative genomics
Published: 2023
PubMed ID: 36867268
Study type:

combined biological and bioinformatics study

Data availability: GSE112214; Supplementary material available at https:// doi. org/ 10. 1007/ s10142-023-00972-x
Code availability: -