circRNA basic information
circBase ID: -
Name: hsa_circ_BCAT2
Synonym: circRNA_051778 / circRNA _051778
Host Gene: BCAT2
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: exosome
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005061
MONDO name: lung adenocarcinoma
Disease details: lung adenocarcinoma / LUAD
Disease DO ID:
3910
Disease MeSH ID:
C538231
Disease NCIt ID:
C3512
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

pleural effusion; plasma

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: mRNAs (2852 predicted targets)
Associated microRNA: miR-6762-5p, miR-762, miR-4697-5p, miR-4739, miR-4640-5p
Biological function: May play a role in cancer development and serves as a potential differential diagnostic biomarker for LA-MPE vs TPE.
Molecular mechanism: Predicted ceRNA mechanism via sponging miRNAs and affecting predicted downstream mRNA targets; functional inference from GO/KEGG enrichment.
Biological pathway or process:

ceRNA regulation (other); other pathway/process (other)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; Sanger Sequencing; RNase R Treatment; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis; Droplet digital PCR

Clinical significance:

Has potential as a marker for differential diagnostic of LA-MPE and TPE, especially in combination with TCT, ESR, and TBA (AUC up to 0.98).

Description:

This study reports that exosomal circRNA_051778 is significantly down-regulated in lung adenocarcinoma-associated malignant pleural effusion compared with tuberculous pleural effusion. A predicted circRNA-miRNA-mRNA network (five candidate miRNAs and 2852 intersecting mRNA targets) and GO/KEGG enrichment suggest possible involvement in signal transduction and cancer-related pathways. circRNA_051778 shows diagnostic value for distinguishing LA-MPE from TPE, especially combined with TCT, ESR, and TBA.

Confidence score:

0.6709

Other information
Title:

[Expression of circRNA_051778 in Lung Adenocarcinoma-Associated Malignant and Tuberculous Pleural Effusions and Its Clinical Significance].

Journal: Sichuan da xue xue bao. Yi xue ban = Journal of Sichuan University. Medical science edition
Published: 2024
PubMed ID: 39507963
Study type:

combined biological and clinical study

Data availability: GSE171540
Code availability: -