circRNA basic information
circBase ID: hsa_circ_0004194
Name: hsa_circ_CTNNB1
Synonym: Circ_0004194
Host Gene: CTNNB1
Genomic location(hg19): chr3:41265511-41268843:+
Genomic location(hg38): chr3:41224020-41227352:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer / CRC
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

CRC tissues; non-tumor colorectal mucosal tissues

Cell lines:

SW480; HCT116; NCM460; SW620; LOVO; HT29; RKO; MC38

In vivo animal model:

cell line-derived xenograft; syngeneic model

circRNA-disease information
Expression pattern:
DN
Associated gene: RXRalpha, beta-catenin, cyclinD1, c-Myc
Associated microRNA: hsa-miR-27a-3p
Biological function: Inhibits CRC cell proliferation, colony formation, migration, invasion; suppresses tumor growth and liver metastasis in vivo.
Molecular mechanism: Acts as a ceRNA sponging hsa-miR-27a-3p to upregulate RXRalpha and inhibit Wnt/beta-catenin signaling (reducing beta-catenin, cyclinD1, c-Myc).
Biological pathway or process:

Wnt/beta-catenin (inhibits); proliferation (inhibits); migration (inhibits); invasion (inhibits); metastasis (inhibits); ceRNA regulation (promotes)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; RNase R Treatment; Sanger Sequencing; divergent primers PCR; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Transfection; CCK8; Colony Formation Assay; Transwell Assay; Luciferase Reporter Assay; RNA Pull-Down; Western Blot; IHC (Immunohistochemistry); In Vivo Animal Model; H&E Staining; Bioinformatics Analysis

Clinical significance:

hsa_circ_0004194 expression was correlated with T stage and N stage in CRC patients; suggested as a therapeutic biomarker.

Description:

hsa_circ_0004194 is down-regulated in colorectal cancer and acts as a tumor suppressor. It sponges hsa-miR-27a-3p to increase RXRalpha and suppress Wnt/beta-catenin signaling, thereby inhibiting CRC cell proliferation, migration/invasion and reducing tumor growth and liver metastasis in vivo.

Confidence score:

0.8634

Other information
Title:

Hsa_circ_0004194 suppresses colorectal cancer progression via hsa-miR-27a-3p.

Journal: Heliyon
Published: 2024
PubMed ID: 39498085
Study type:

combined biological and clinical study

Data availability: Supplementary data to this article can be found online at https://doi.org/10.1016/j.heliyon.2024.e39549.
Code availability: -