circRNA basic information
circBase ID: -
Name: hsa_circ_AR
Synonym: circAR-E2In2
Host Gene: AR
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0850353
MONDO name: castration-resistant prostate carcinoma
Disease details: metastatic castration-resistant prostate cancer
Disease DO ID:
0080909
Disease MeSH ID:
-
Disease NCIt ID:
C130234
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

mCRPC tissues; PDX tumors

Cell lines:

VCaP; 22Rv1; LNCaP95

In vivo animal model:

patient-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: AR-FL, AR-V3, AR-V7, AR-V9
Associated microRNA: -
Biological function: Associated with castration-resistant progression; potential circulating marker of AR/AR-variant expression.
Molecular mechanism: Transcriptional mechanism: circAR level changes mirror AR-FL and AR-V levels; androgen suppresses expression and antiandrogen attenuates suppression.
Biological pathway or process:

not specified

Detected method:
Q
S
Validation methods:

divergent primers PCR; Sanger Sequencing; RNase R Treatment; RT-qPCR; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; In Vivo Animal Model; Bioinformatics Analysis; RNA-seq

Clinical significance:

Potential circulating biomarker for castration-resistant progression (general circAR statement).

Description:

circAR-E2In2 is upregulated in castration-resistant PDX tumors and its expression tracks with linear AR/AR-variant transcription, consistent with transcriptional regulation rather than a global increase in circRNA formation. It is predominantly cytoplasmic and is discussed as part of an AR-circRNA set with potential biomarker value in mCRPC.

Confidence score:

0.695

Other information
Title:

Circular RNAs add diversity to androgen receptor isoform repertoire in castration-resistant prostate cancer.

Journal: Oncogene
Published: 2019
PubMed ID: 31409897
Study type:

combined biological and clinical study

Data availability: dbGaP: pht004946.v1.p1; GEO: GSE92574
Code availability: -