circRNA basic information
circBase ID: hsa_circ_0000615
Name: hsa_circ_ZNF609
Synonym: -
Host Gene: ZNF609
Genomic location(hg19): chr15:64791491-64792365:+
Genomic location(hg38): chr15:64499292-64500166:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

tumor tissue; adjacent normal colon tissue; serum

Cell lines:

FHC; HCT116; HT29

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: p53, Bax, Bcl-2
Associated microRNA: -
Biological function: Promotes apoptosis and inhibits cell activity/proliferation in colorectal cancer cells.
Molecular mechanism: circZNF609 overexpression upregulates p53 and shifts Bax/Bcl-2 to induce apoptosis.
Biological pathway or process:

apoptosis (promotes); proliferation (inhibits)

Detected method:
Q
Validation methods:

divergent primers PCR; RT-qPCR; Sanger Sequencing; Transfection; CCK8; Colony Formation Assay; Annexin V/PI Flow Cytometry; Western Blot; Clinical Sample Validation; ROC Analysis

Clinical significance:

Down-regulated in serum of patients with colorectal cancer and showed diagnostic value by ROC analysis (AUC 0.767).

Description:

circZNF609 is down-regulated in colorectal cancer tissues and patient serum. Its overexpression in HCT116 cells inhibits cell activity and promotes apoptosis, accompanied by increased p53 and Bax and decreased Bcl-2, suggesting a pro-apoptotic role via p53 upregulation. Serum circZNF609 shows potential diagnostic value based on ROC analysis.

Confidence score:

0.7353

Other information
Title:

Expression of circZNF609 is Down-Regulated in Colorectal Cancer Tissue and Promotes Apoptosis in Colorectal Cancer Cells by Upregulating p53.

Journal: Medical science monitor : international medical journal of experimental and clinical research
Published: 2019
PubMed ID: 31401644
Study type:

combined biological and clinical study

Data availability: -
Code availability: -